Tepidibacter aestuarii: T8CH_0300
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Entry
T8CH_0300 CDS
T08095
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
teb
Tepidibacter aestuarii
Pathway
teb03420
Nucleotide excision repair
teb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
teb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
T8CH_0300 (pcrA)
03430 Mismatch repair
T8CH_0300 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
teb03400
]
T8CH_0300 (pcrA)
Enzymes [BR:
teb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T8CH_0300 (pcrA)
DNA repair and recombination proteins [BR:
teb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T8CH_0300 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
T8CH_0300 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
DUF3553
AAA_11
WD40_MABP1-WDR62_2nd
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
CAH2212043
LinkDB
All DBs
Position
T8CH:308106..310274
Genome browser
AA seq
722 aa
AA seq
DB search
MDLSTLNDMQRKAVLKTDGALLLLAGAGSGKTRVLTYRIAHLINDLEVHPSNILAITFTN
KAANEMRERVEGIIGSDAQNMWISTFHSCCVRILRKDIDKIGYTRSFVIYDRSDQMTLMK
DCIKELNINDKMYEAKTVLGHISDAKDKMINSKRFKEIHQNDFRMSNIAKVYSLYQERLM
RNNALDFDDLIMKAIEILENNEGVLDFYQRKFRYIMVDEYQDTNRAQYKLVNMLAKRHGN
LCVVGDDDQSIYGWRGADIKNILEFEKDYEDALVVKLEQNYRSTQTILDAANKVIANNIT
RKDKKLWTESCLGDRIRTFKSRDEREEGDFIAHSIKKLNNDKGIEYRECAILYRTNAQSR
ALEEALIKQNIKYKIFGGIKFYERKEIKDLIAYLRIIQNPVDDISLKRIINVPKRGIGLR
TLEKIEDVALLKKESMYLSLYDADNIDVSTRVKSKLREFTTLISSLSAMKDVYSVTKLIE
KVLENTGYIKELEKDDSIENQTRIENLKEFLSVAMEFEKTSEEKDLETFLATISLISDMD
ASDEDDDYVSLMTLHSAKGLEFPVVFLAGLEEGIFPISRALTDEIELEEERRLCYVGITR
AMKTLYMTYASSRTIYGKTNYSRISRFIGELPKDCLKSLNKNEPENKILKKQNSLVEKYK
QRHMEKETKSVDNNNVSLGSKVKHPTFGTGTVVAKNGSTVSIAFENKGVKSINLDYVKLN
II
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatttatctacattgaatgatatgcaaagaaaagcagtacttaaaacggacggtgca
ctacttcttttagctggtgcggggtctggaaagacaagagttttaacttatagaatagca
catcttataaatgatttagaagtacatccttctaatatactggcaattacattcactaat
aaggctgctaatgagatgagggaaagagtagagggaataataggatcagatgcacagaat
atgtggataagtacatttcactcgtgttgcgttagaatacttagaaaagatatagacaag
ataggatatacaagaagctttgttatatacgatagatcggatcagatgacacttatgaag
gattgtataaaagagcttaacataaatgacaaaatgtatgaagcaaaaactgtactgggc
catatatctgatgctaaggataagatgataaattcaaagagatttaaagaaattcaccaa
aatgatttcagaatgagtaatattgcaaaagtttactctttatatcaagaaagacttatg
agaaacaatgctcttgattttgatgatcttataatgaaggctattgagatacttgagaat
aatgaaggtgttttagatttttatcaaagaaagttcagatatataatggttgatgagtac
caagatacgaatagggcacagtataagcttgtaaatatgctggctaaaagacatggtaac
ttatgtgttgttggtgatgatgatcaatctatatacggttggagaggtgcagatataaag
aatatacttgagtttgaaaaagattatgaagatgcactagttgtaaagcttgagcaaaat
tatagatcaactcaaactatacttgatgctgctaataaggttatagctaataatataact
agaaaagataagaagttatggacggagagctgtttaggagatagaataagaacttttaaa
tcaagagatgaaagagaagaaggagattttatagctcatagtataaaaaaattaaataac
gacaaaggtatagagtatagagaatgtgctatcctttatagaactaatgcccaatcacgt
gctctagaggaagctttgataaagcaaaatataaagtataagatatttggtggtataaaa
ttctacgagagaaaagagataaaggatctgatagcttatttaagaataatacaaaatcct
gtagatgatatttctcttaagagaataataaatgttccaaagagaggtataggacttaga
actcttgaaaaaatagaagatgttgctcttttaaagaaggagagcatgtacctttcttta
tatgatgctgataatatagacgtatctactagagttaaaagtaagctaagagagtttaca
actttaatatcatctcttagtgctatgaaggatgtatattctgtaactaagcttatagaa
aaggttctagagaacacaggatatataaaagagcttgaaaaggatgatagcatagagaat
caaactagaatagagaatttaaaggaatttttatctgttgctatggaatttgaaaaaaca
agtgaagagaaggatttagaaacattcttagctactatatctcttatatctgatatggat
gcttctgatgaagatgatgactatgtttctttaatgactctacacagtgctaagggactt
gagtttccagtagtatttttagcagggcttgaagaaggcatattccctataagtagagct
ttaactgatgagatagagcttgaggaagagagaagactttgctatgttggaattacaaga
gctatgaagactttatatatgacgtatgcatcttcaagaactatatacggaaagactaac
tattctaggatatcaagatttataggagaacttcctaaagattgcttaaaaagtcttaat
aagaatgagccggagaataagatacttaaaaaacagaacagcttagttgaaaaatacaag
caaagacatatggaaaaagaaactaagagtgtagataataataatgtaagtcttggatca
aaggttaaacatccaacatttggaacgggaacagttgtagcaaagaatggctctactgtt
agtatagcttttgagaataaaggggttaagagcattaacttagattatgtaaagttaaat
ataatataa
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