Tepidibacter aestuarii: T8CH_1447
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Entry
T8CH_1447 CDS
T08095
Name
(GenBank) tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase)
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
teb
Tepidibacter aestuarii
Brite
KEGG Orthology (KO) [BR:
teb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
teb03016
]
T8CH_1447
Enzymes [BR:
teb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
T8CH_1447
Transfer RNA biogenesis [BR:
teb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
T8CH_1447
Prokaryotic type
tRNA splicing ligases
T8CH_1447
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
CAH2213260
LinkDB
All DBs
Position
T8CH:complement(1439372..1440595)
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AA seq
407 aa
AA seq
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MIEIKGKYNTAKIFIDTIEQETINQITDLLNQEFIDGSRVRIMPDTHAGKGCTIGTTMTI
QDKIVPNLVGVDIGCGMICVELGNIHLEFSKLDEFIRTNIPFGYAINQHAQTDFKNSISN
LICFRDLPKSAKEFNRALGSLGSGNHFIELNVDKNDVKYLVVHSGSRNLGKQVATYYQNK
AYDYHNGLNEKYEDEKSKLINNYKKQGKRKEIQNALKQLQKEYIKESEIPKDLCYLKGKL
MNDYLHDMKIVQQYANLNRELMAKRIIEECLNLQYEKLSKFQTIHNYIDLENMILRKGAI
SAKKNEKVIIPINMRDGSIIATGKGNEDWNESAPHGAGRLMSRSKAKQLLNINEYKESMK
DVWTTSVRESTIDEAPMAYKPIEEIVENTKDTINIIDVIRPLYNFKS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaatcaaagggaaatacaatactgcaaagatttttatagatactattgaacaa
gaaaccattaatcaaataactgacttgctaaatcaagaatttatagatggtagtagagta
agaataatgccagatactcatgcaggaaaaggatgtacaataggaacgacaatgactata
caagataaaattgttccaaatcttgttggtgtagatattggttgtggcatgatctgtgta
gagttgggaaatattcatttagagttttctaaactagatgaatttattagaacaaacatc
ccttttggatatgctattaatcaacatgcacaaacagattttaaaaatagtatatctaat
ctaatttgctttagagatctgccaaaatcagcaaaagaatttaacagagctttaggaagc
cttggatctggaaatcattttatagagcttaatgttgataaaaacgatgtaaaatatcta
gtggttcatagtggaagtagaaatttaggaaaacaagtggcaacatattatcaaaacaaa
gcatatgattatcacaatggattaaatgagaaatatgaagatgaaaaatctaaattaatt
aataattataaaaaacaaggtaaacgtaaagaaattcaaaatgctttaaaacaattacaa
aaagaatatatcaaagaaagtgaaattcctaaagatctatgttatttaaaaggaaaatta
atgaatgattatttacatgacatgaaaattgtacaacaatatgctaatctaaaccgagaa
ctaatggcaaaaagaattatagaagaatgtttaaatttacaatatgaaaaattaagcaag
ttccaaactattcataattacattgacttagaaaatatgattcttagaaaaggagccatt
tcagctaaaaaaaatgaaaaagtaattattcctataaatatgagagatgggtctattatt
gcaacaggaaaaggaaatgaagattggaacgaatctgcacctcatggagctggaagatta
atgagccgaagtaaagctaaacaattgctcaatataaatgaatacaaagagtctatgaaa
gatgtgtggactacatcggttagagaatctactatagatgaagcacctatggcctataag
cctatcgaagaaatagtagaaaacacaaaagacactataaatattatagatgttattaga
ccgttatataattttaaatcttaa
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