Tepidibacter aestuarii: T8CH_1481
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Entry
T8CH_1481 CDS
T08095
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
teb
Tepidibacter aestuarii
Pathway
teb03410
Base excision repair
teb03430
Mismatch repair
teb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
teb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T8CH_1481
03430 Mismatch repair
T8CH_1481
03440 Homologous recombination
T8CH_1481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
teb03400
]
T8CH_1481
DNA repair and recombination proteins [BR:
teb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
T8CH_1481
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
T8CH_1481
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
T8CH_1481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
CAH2213294
LinkDB
All DBs
Position
T8CH:1468674..1470356
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AA seq
560 aa
AA seq
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MNKIWDVKGEKIQGLSVVESILHYKGITDKKEIEEFLSDKPKKTYDPFLIKNMKEAVDKI
KCHIQSGNKIVIFGDYDVDGVTSSALLVEFFSNITYNIDYYIPNRFSEGYGLNKDAIKSI
KEDMEADLIITVDNGISSFDEVNYAKEIGLDIIVTDHHNPPEKLPECIIINVKQDDDEYP
FKELCGCGVAFKLAQALQRELDLPRSTLSAPLDLVALGTIADLVPLVDENRTLVKYGLKN
INSNKRLGIASLRKEVGLDDKEISAGRIGYVLGPCFNAAGRIEDAKLGVKLLLEKNEDEA
KKVAAILHNLNSERQAIQEKGEEFCRLLVETNYMNHDFLVVRADGVSEGVIGIVAGRIKD
LFYKPTLVVTKSEEGYLKGSGRSIKGINIYDELVNVSDLFLGFGGHEMACGFSLEEDKLD
ELREKLDRRAKKIKDIDSNIFVPKLNVMTELDAEQLSVELINEISKLEPYGMANAKPLFM
IKDIQVNPSWTKGCGKNNVHLKLSGKKGNTFLSGIGFSLAEKYEALNNQNTVDVVFSPEI
NEYNGKVSPQMVMEDIKESK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagatttgggatgtaaaaggagaaaaaatacaagggctatctgtagttgaaagt
atacttcactataaaggtataacagataaaaaagagatagaagaatttttaagtgataag
cccaaaaaaacatacgacccattccttataaaaaatatgaaggaagctgtagacaagata
aaatgtcatatacaaagcggcaataaaatagttatatttggagattacgatgtagatggg
gttacatcatctgcattgttggtagagtttttttcaaatataacttacaatatagattat
tatataccgaatagattctcagaaggatacggtcttaataaagatgctataaaaagtatt
aaagaagatatggaagcagacctaattataactgtagacaatggaattagttcatttgat
gaagtcaactatgctaaagaaataggtctagatattatagttacagaccaccataatccg
cctgaaaagcttccagagtgtataataataaatgtaaagcaagatgatgatgagtatcca
tttaaagaactttgtggatgtggagtagcctttaagttagctcaggctcttcaaagagaa
ttagatttacctaggagtacattatcggctccacttgaccttgtagcgcttggaacaata
gcagaccttgttccattagtagatgaaaatagaaccttagttaagtacggtttaaaaaat
ataaattcaaataaaagattaggtatagcttctttaagaaaagaagttggacttgacgat
aaagagataagtgctgggagaataggatatgtgctgggaccgtgttttaatgctgcggga
agaattgaagatgcaaagcttggagtaaaacttctcttggaaaaaaacgaagatgaagca
aaaaaagtagcagccatacttcacaatttaaattctgaaagacaggctattcaagaaaaa
ggagaagaattctgtaggttattagtagaaactaattatatgaatcatgactttttagta
gtaagagcagatggagtatcagaaggagtcataggaattgttgcgggtagaataaaggat
ttattctataagccgactttagtagtaacgaaaagtgaagaagggtatcttaagggaagt
ggaagaagtataaagggtattaatatatatgatgaacttgtcaatgtttcagatttattc
ttgggatttggaggccacgaaatggcatgtggattctcgctagaagaagataagctagat
gagttaagagaaaagcttgatagaagagctaaaaaaataaaggatatagattcaaatata
tttgttccaaagcttaatgtaatgacagaacttgatgcagaacaattgagtgtagaactt
ataaatgagatatcaaagcttgagccatatggtatggctaatgcaaaacctctatttatg
attaaagatatacaggtaaatcctagttggactaagggttgtggaaagaataatgtccat
ttaaagcttagtggaaaaaagggaaatacattcttaagtggaatagggttttcacttgct
gaaaaatatgaagctttaaataatcaaaacactgttgatgtagtatttagtccggaaatt
aatgaatacaatggaaaagttagtcctcagatggttatggaggatataaaggaatctaaa
taa
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