Tepidibacter aestuarii: T8CH_2518
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Entry
T8CH_2518 CDS
T08095
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
teb
Tepidibacter aestuarii
Brite
KEGG Orthology (KO) [BR:
teb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
teb03032
]
T8CH_2518
03400 DNA repair and recombination proteins [BR:
teb03400
]
T8CH_2518
Enzymes [BR:
teb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
T8CH_2518
DNA replication proteins [BR:
teb03032
]
Prokaryotic type
DNA Topoisomerases
T8CH_2518
DNA repair and recombination proteins [BR:
teb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
T8CH_2518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DUF4806
Spt4
PIN_9
Motif
Other DBs
NCBI-ProteinID:
CAH2214369
LinkDB
All DBs
Position
T8CH:complement(2470722..2472794)
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AA seq
690 aa
AA seq
DB search
MVENIERQRITETLEENYMPYAMSVIVSRAIPEIDGFKPSHRKLLYTMYKMGLLNSNKTK
SANVVGQTMKLNPHGDMAIYETLVRLTRGNDSLLHPFIDSKGNFGKKYSKDMSFAAPRYT
EVKLDDLCKEIFKDIDKNTVKFVDNYDGTLKEPVLLPTTYPNVLVNANQGIAVGMSSSIC
SFNLEEVCSATINYIKNKDVDISDYIKAPDFSTGGYIIYSKDQMEKIYETGRGSFKLRAK
YRYDKKNNCIEVYEIPYTTNIETIIDKIIDLVKDNKIKEISDVRDETDLNGLKVTLDLKR
NTDVDLLMHKLYKMTTLEDSFSCNFNMLINGQPKVLGIKAVLREWVDFRVECIKGYLQYD
IEKKTDRLHLLLGLEKILLDIDKAIDIIRNTKEDKEVIPNLIKGFNIDKIQAEYIAEIKL
RNLNKEYILKQLNNIKTLQSDLENLNETIKSDKKIKNIIIKELKEVSKKYKKPRKTEIIS
NDDIKEIKDEHLISDYNVKLFLTNENYFKKISLASLRSFSEQKLKDDDFIIQEIDANNKD
EILLFSNKQNLYKLKVYDLADCKASSLGEYLTNILKLKEDENIIYMCLSNNYEGYMLYCF
RDAKIAKTHIENYKTKTNRRKLVKAYSDKSELVRMLYIKDDVKLELYKNNKKASVINTKD
IELQSTKTSKGIEVLKLGKRSYMTDVKILD
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaaatatagaaagacaaagaattacagaaacgctagaagaaaattatatgccg
tatgctatgagcgtaatagtttcaagagctattccagagatagatggttttaagccaagt
catagaaagcttttatatactatgtataaaatggggcttttaaattccaataaaacaaaa
tcagcaaatgttgttggacaaactatgaagttaaatccccatggtgatatggctatatat
gagactctagttagattgacaagaggaaatgattctttacttcacccgtttatagattct
aagggaaactttggtaaaaaatattctaaagatatgagctttgcagcacctagatataca
gaggtaaaattagatgatctatgcaaggagatttttaaggatatagataaaaatactgtt
aaatttgtagacaattatgatggtactttaaaagagcctgtacttttgcctacaacatac
cctaatgtacttgtaaatgcaaatcaaggtatcgctgttggtatgtcaagtagtatatgt
agttttaacttagaagaggtatgtagtgctactattaattatattaaaaataaagatgtg
gatataagtgattatataaaggctccggatttttcaacgggtggatatataatatattca
aaagatcaaatggaaaagatatatgaaacaggacgaggtagctttaaattaagagctaag
tatagatatgataaaaagaacaactgtatagaagtatatgaaatcccttatactactaat
atagagactataatagataaaataatagatcttgttaaagacaataaaattaaagaaata
tcagatgttagagatgagactgatttaaatggtcttaaggttactttggatttaaaaaga
aatacggacgtagatttgcttatgcataagctttataagatgactactcttgaagatagt
ttttcttgcaattttaatatgttaataaatgggcaacctaaggtattaggcataaaggca
gttctaagagaatgggttgattttagagtagagtgcattaagggatatttacaatatgat
atagagaaaaagacagatagattacatcttctattagggcttgagaaaattttacttgat
atagataaggctattgatataattagaaatactaaagaagataaagaagttatacctaac
ttgattaaaggatttaatatagataaaattcaggcagaatatatagctgaaataaagctt
aggaatttaaataaagaatatatattaaaacagctaaataatataaagactttgcagtct
gatttggaaaatcttaatgaaactattaaaagtgataaaaaaataaaaaatataataata
aaagaattaaaagaggtttctaaaaaatacaaaaaacctagaaagactgaaataataagc
aatgatgatataaaagaaataaaagatgaacatttaataagtgactataatgtcaagtta
tttttaactaatgagaattactttaagaagatatctctcgcttcgcttagatctttttcg
gagcaaaaattgaaagatgatgactttataatacaagagatagatgctaataataaggat
gaaattctacttttttcaaataagcagaatttatataaattaaaagtttatgaccttgct
gattgtaaggctagttctttaggtgagtatttaactaatatattaaagctaaaggaagat
gagaatattatatatatgtgtctttctaataattatgaaggatatatgctttattgtttt
agggatgctaagatagctaaaactcatatagaaaattataagactaagactaatagaaga
aagcttgtaaaggcttattctgataagtcagaactagttcgcatgctttatataaaagat
gatgttaaattagagctttataaaaataataaaaaagcttctgtcataaatactaaggat
atagagcttcaatcaacaaaaacttctaaagggatagaagttttaaagcttggaaagaga
agctatatgaccgatgtgaaaatattggattaa
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