Tepidibacter aestuarii: T8CH_2936
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Entry
T8CH_2936 CDS
T08095
Name
(GenBank) 3'-5' exoribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
teb
Tepidibacter aestuarii
Brite
KEGG Orthology (KO) [BR:
teb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
teb03019
]
T8CH_2936
Messenger RNA biogenesis [BR:
teb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
T8CH_2936
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GFIT
Motif
Pfam:
HD
TBSV_P22
G8
TrkA_C
Cas3_HD
Abhydrolase_5
Motif
Other DBs
NCBI-ProteinID:
CAH2214803
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Position
T8CH:complement(2920812..2921708)
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AA seq
298 aa
AA seq
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MKSIFVKDINDNESFKSSFMIIKKLARREGTLIAFIGDKTGDVKAHIPDSTDRLEVGDVI
SVKATKDGVLNVQSFKKEKTFNIEEFLPSVERPIEDIMDEMNRISKEVFESDECRALDEY
FFNDNKFVERFKKGIGGLSQHHNYLGGLAEHTLNSMYLAKIMTDRYNCRYKEIAILGAKL
HDIGKIEEYKIDGPFSVTMRGDMEGHIVMGVTMLEEAFRSGGDIYSEDFKMRIKSCIIQH
HGKLEYGSPKVPKTEEAFIVHYADYVDAMLNKIEQVRNITEPNNWSEYDRRIGTKLYM
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtatttttgttaaagatataaatgataatgaaagttttaaatcaagttttatg
ataataaagaagcttgctagaagagaaggtactcttattgcttttattggagataaaact
ggagatgtaaaggctcatattcctgatagtacggataggttagaggtaggcgatgtaatt
tctgttaaggcaaccaaagatggtgttcttaatgtacagagttttaaaaaggaaaaaaca
tttaatatagaagagtttcttcctagtgttgaaagaccgattgaagatattatggatgaa
atgaataggatatctaaagaagtatttgaaagtgatgagtgtagagctttagatgaatat
tttttcaatgataataaatttgtagaaagatttaaaaaaggcattggaggacttagtcag
caccataattatttaggaggccttgcagaacatactttgaattctatgtatttggcaaag
ataatgacagatagatacaattgtaggtataaggaaatagcaattcttggagctaagtta
catgacattggcaaaattgaagaatacaaaattgatggacctttttctgtaacaatgcgt
ggagatatggaggggcatatagttatgggagttactatgttagaagaggcttttcgttct
ggtggagatatttatagtgaagattttaaaatgaggatcaaaagctgtataattcagcat
catgggaaattagaatatggttcacctaaggttccaaaaacagaggaagcgttcatagta
cattatgcggattatgttgatgcaatgttaaacaaaatagagcaggttagaaatattaca
gaaccaaataattggtcagaatatgatagaagaattggaacaaaactatatatgtaa
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