Tepidibacter aestuarii: T8CH_2971
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Entry
T8CH_2971 CDS
T08095
Symbol
dnaEC
Name
(GenBank) DNA polymerase III (alpha subunit), DnaE3
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
teb
Tepidibacter aestuarii
Pathway
teb03030
DNA replication
teb03430
Mismatch repair
teb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
teb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T8CH_2971 (dnaEC)
03430 Mismatch repair
T8CH_2971 (dnaEC)
03440 Homologous recombination
T8CH_2971 (dnaEC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
teb03032
]
T8CH_2971 (dnaEC)
03400 DNA repair and recombination proteins [BR:
teb03400
]
T8CH_2971 (dnaEC)
Enzymes [BR:
teb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T8CH_2971 (dnaEC)
DNA replication proteins [BR:
teb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T8CH_2971 (dnaEC)
DNA repair and recombination proteins [BR:
teb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T8CH_2971 (dnaEC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAH2214839
LinkDB
All DBs
Position
T8CH:complement(2965797..2969282)
Genome browser
AA seq
1161 aa
AA seq
DB search
MIRDFAHLHVHTQYSLLDGFARIDKVIKRAKELDMKSVAITDHGCMFGVIDFYKKAKKEG
IKPVIGCEVYTAPRSLKDKDPNFDKYQGHLVLLAKNMTGYKNLIKLVSKAYVEGFYYKPR
VDYEELKKNSDGIIALSACLGGDIQQYLMKRNYEKAKEIALNLNEMFGADNFYLEIQDHG
IREQKEVNLSLLKLSKETGIPLVATNDVHYVNKEDSKTHDILLCIQTGKTFQDEKRMKFE
TEEFYLKSKEEMYELFSYAPTALENTVKIADMCNVEFDFSQIHLPEYDVPSGFTKNDYLR
KLCTDGLYERFESPSQEMIDRLNYELDVINNMGYVEYFLIVWDFINFSKENNIMVGPGRG
SAAGSIVAYTLKITDIDPMKYDLIFERFLNPERVSMPDIDIDFCYERREEVIDYVKRKYG
DDHVAQIITFGTMGAKAAIRDVGRVLDVSYAQVDKIAKEIPFALGMTINKALEVNKNLKN
MYEEDKVVKEIIDTSRDLEGMPRHASTHAAGVVISKESVDSYVPLYMHENGVTTQFTMTT
LEELGLLKMDFLGLRTLTVIRDALELIQNKHNVKIDFSKMEYDDKKVYELLSSGNTLGIF
QLESAGMRQFMKDLKPDNFEDIVAGISLYRPGPMDSIPTYIKNKNNPDEVKYLHKKLEPI
LDVTYGCLVYQEQVMRVVRDLAGYSYGRSDLVRRAMGKKKMDVMEQERQYFIHGKLDENG
DIEIAGCVRNGVSEEIANQIYDDMIDFAKYAFNKSHAAAYGVLGYQTAYLKAHYPVEFMA
ALITSVMGNTDKVVEYIRECNSLGIQVLKPDIKKSFGKFSVEEKNIRFGLEAVKNVGSNA
IRDIVAQREISGEFEDFIEFCKTINSKDLNKRVIESLIKCGAFDSISPNRAQLMAGYEKI
IESIINDKKKNIQGQISLFEMSDKKEENNIYTLPDVSEFKEKEKLLLEKEVLGMYISGHP
LSQYERELKLNTNINNFTLSKTQEEDYQKFLKLDNKDVIIGGIIINKTIKTTKRNDIMAF
IEVEDLDGSIEVIVFPRILQKYSDIILEDKIIYIKGKMSIKEGENAKIIANEFEEIIEIN
DKELWVKLNDINDNEELYSLKKILNKHKGNSLVCLYCQKSKKAFKAEKNCMVDLNEELIK
ELEESFGVQNIKIKNISLKNI
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
gtgataagagattttgctcatcttcatgtgcatacacaatatagtttacttgatggattt
gcgcgaatagataaggtgattaaaagagctaaggaacttgatatgaagtcggttgctatt
acggaccatggctgtatgtttggtgtgatagatttttataaaaaggctaaaaaagaggga
ataaaaccagtaatagggtgtgaggtatatacagctcctagatctttaaaagataaagat
cctaattttgataaataccaaggacatttagttcttcttgcaaagaacatgacaggatat
aaaaatcttataaagctcgtttcaaaggcttatgttgaaggtttttattataaaccaagg
gttgattatgaagaactaaaaaagaatagtgatggaataatagctttatctgcttgtctt
ggaggagatatacagcagtatcttatgaagagaaattacgagaaggcaaaggagatagcc
cttaacttaaatgaaatgtttggagcagataatttttatcttgaaattcaagatcatggg
ataagggaacaaaaagaagtaaatttaagccttttgaagttgtcaaaagaaactggtata
ccacttgttgcgactaatgatgtacactatgtaaacaaagaagattcaaaaactcatgat
atactgctttgtattcaaactggaaagacttttcaagatgagaaaaggatgaagtttgaa
acggaggagttttatttaaagtcaaaggaagagatgtatgaattattttcgtatgcacct
actgctcttgagaatacagtcaaaatagctgatatgtgtaatgttgaatttgatttcagt
caaattcacttacctgagtacgatgtgcccagtggatttacaaaaaatgattatttgaga
aagttatgtacggatggattgtatgaaaggtttgagagtccatctcaggaaatgatagat
agattaaattatgagctagatgtaataaataatatgggatatgtagaatacttcttgata
gtttgggattttataaatttttcaaaagagaataatataatggtaggtccaggaagggga
agtgcggctggatcaatagttgcttatactcttaagataacggatatagaccctatgaag
tatgatcttatattcgaaagatttttaaatcctgaaagggtttcaatgcccgatattgat
atagatttttgctatgaaagaagagaagaagtaatagattacgttaaaagaaagtatgga
gatgaccatgtagctcagataataacatttggaacaatgggggctaaggctgcaataaga
gatgtcggaagagttttagatgttagttatgctcaggttgataaaatagcaaaagaaatt
ccatttgcacttggaatgactataaataaagcgcttgaagtaaataaaaaccttaaaaat
atgtatgaagaagataaggtagttaaggaaataatagatacatcaagagatcttgaagga
atgccaagacatgcatcaactcatgcagccggggttgttatatcaaaggaatcagtagat
agttatgttccattatatatgcatgaaaatggagttacaactcaatttactatgactaca
cttgaagagttaggtcttttgaaaatggactttttaggtcttagaactttaacagtaata
agagatgctcttgagcttatacaaaacaaacataatgtaaaaatagatttttctaaaatg
gaatacgatgataaaaaagtgtacgaacttttaagttcaggaaatacgcttggaatattc
cagctagaaagtgctggaatgagacagtttatgaaggatctaaaacctgataattttgag
gatatagtagccggaatatctctttatagaccgggacctatggattctatacctacttat
ataaaaaataagaataatccagatgaagtaaaatatcttcataaaaaattagaacctata
cttgatgtaacttatggatgtcttgtttatcaagagcaggtaatgagggtagttagagat
ttagctggatattcttatggacgaagtgatttggttagacgtgctatggggaaaaagaaa
atggatgtaatggagcaggaaagacaatacttcatacatggtaaacttgatgaaaatgga
gatattgaaatagcaggatgtgttagaaatggagtaagtgaagaaatagcaaaccaaata
tatgatgatatgatagattttgcgaagtacgcatttaacaagtcgcatgcagctgcctat
ggagttttaggataccaaactgcatatttaaaagcacattaccctgtagaatttatggca
gctcttataactagcgtaatgggaaatacagataaagttgtagagtatataagagaatgt
aatagtcttggaatacaggttttaaagccagatataaaaaagagctttggaaaattttca
gttgaagaaaaaaatataagatttggactggaagctgtaaaaaatgtaggatcaaatgct
ataagagatatagtagcacaaagagaaataagtggtgagtttgaggattttattgaattt
tgcaaaaccattaattcgaaggatttaaataaacgagttatagaatctcttataaaatgt
ggagcttttgacagtataagtcctaatagggcacaactaatggcaggttatgaaaaaata
atagagagcataataaatgataagaaaaaaaatattcaaggacagatatctttatttgaa
atgagtgataaaaaagaagaaaataatatatatacacttcctgatgtatctgaatttaag
gaaaaagagaagcttttattagaaaaggaagttttaggtatgtatataagtggacatcca
ttatcacaatatgaaagagagcttaaattgaatacaaatataaataattttactctttca
aaaactcaagaagaagattatcagaaatttttaaaactagacaataaagatgttattata
ggcggtataataataaacaaaactataaaaactactaagagaaacgatataatggctttt
atagaagtagaagatttagatggaagcatagaagtaatagtatttccaagaatccttcaa
aaatactctgatataatattggaagataaaattatatatataaagggaaaaatgagtata
aaagaaggtgaaaatgcaaaaattatagctaatgaatttgaagaaataatagaaattaat
gataaagaattatgggttaaattaaatgatataaatgataatgaagaattatatagcctg
aagaaaatattaaataaacacaaagggaattcattggtttgtttatattgtcaaaaatcg
aaaaaagcatttaaagcagaaaaaaattgtatggttgatttgaatgaagagttaataaag
gaattagaagaatcttttggtgttcagaatattaaaatcaaaaatataagtttaaaaaat
atttaa
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