Tepidibacter aestuarii: T8CH_3260
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Entry
T8CH_3260 CDS
T08095
Symbol
hbs
Name
(GenBank) non-specific DNA-binding protein HBsu
KO
K03530
DNA-binding protein HU-beta
Organism
teb
Tepidibacter aestuarii
Brite
KEGG Orthology (KO) [BR:
teb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
teb03032
]
T8CH_3260 (hbs)
03036 Chromosome and associated proteins [BR:
teb03036
]
T8CH_3260 (hbs)
03400 DNA repair and recombination proteins [BR:
teb03400
]
T8CH_3260 (hbs)
DNA replication proteins [BR:
teb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
T8CH_3260 (hbs)
Chromosome and associated proteins [BR:
teb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
T8CH_3260 (hbs)
DNA repair and recombination proteins [BR:
teb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
T8CH_3260 (hbs)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Peptidase_C80
At5g54830
Motif
Other DBs
NCBI-ProteinID:
CAH2215120
LinkDB
All DBs
Position
T8CH:complement(3292156..3292434)
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AA seq
92 aa
AA seq
DB search
MNKAELVAKMAEYSGLTKKDAEAGLNAFMKSVEEALVEGDKVQLVGFGTFETRERAARQG
RNPRNPEQVIEIPASKAPVFKAGKGLKDTVNK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaggctgaattagtagctaaaatggctgaatatagtggattaactaagaaggat
gcagaagcaggacttaacgcatttatgaaatctgtagaagaggcattagttgagggtgac
aaggttcaattagttggatttggaactttcgaaacaagagaaagagctgcaagacaaggt
agaaacccaagaaacccagagcaagttattgaaatacctgcatctaaggctccagttttc
aaagctggaaaaggtcttaaggatactgtaaataagtaa
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