Tepidibacter aestuarii: T8CH_3339
Help
Entry
T8CH_3339 CDS
T08095
Symbol
truA
Name
(GenBank) tRNA pseudouridine (38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
teb
Tepidibacter aestuarii
Brite
KEGG Orthology (KO) [BR:
teb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
teb03016
]
T8CH_3339 (truA)
Enzymes [BR:
teb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
T8CH_3339 (truA)
Transfer RNA biogenesis [BR:
teb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
T8CH_3339 (truA)
Prokaryotic type
T8CH_3339 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Pus10_C
DUF2344
DUF3876
Motif
Other DBs
NCBI-ProteinID:
CAH2215191
LinkDB
All DBs
Position
T8CH:complement(3378741..3379472)
Genome browser
AA seq
243 aa
AA seq
DB search
MRNIMITIEYKGTNYCGWQIQNDRTSIQECIESAIYKITNEKANVTSSGRTDAGVHALGQ
VANFYTNSRIPVDKLPGAINSKLPDDISILDAKEVDYDFHARYSAKKKRYRYVILNSKYK
RPIYNDFAYLVKYKLDIDKMIQESKYLIGEHDFKGFMSTGSSVKTTVRTIYDISLKKEED
LIILEVEGNGFLYNMVRIIAGTLVDIGRGRINLSLKDIIESKNRDNAGHTADSKGLFLKK
VYY
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatataatgattactatagaatataaaggaacaaattattgtgggtggcaaata
caaaatgatagaacatctatacaagaatgtatagaaagtgctatatataagataactaat
gaaaaagcaaatgtaacatcatcaggaagaacagatgcaggagttcatgctttaggacaa
gtagcaaatttctatactaatagtcgtatacctgttgataaactaccaggagctattaat
tctaagttaccagatgatataagtatattagatgctaaagaagtagattatgattttcat
gcaagatatagtgctaaaaagaagcgatataggtatgtaatactaaactctaaatataaa
agacctatttataatgattttgcttatttagtgaaatataaattagatatagataaaatg
atacaagagtctaaatatttgattggagagcatgattttaaaggattcatgagcacggga
tcatctgttaaaacaactgttagaaccatatacgatataagcttgaaaaaagaagaagat
ttaataatattagaggtagaaggaaatggatttttgtataatatggttagaataatagca
ggaactctggtagatataggtagaggaagaataaatttaagtctaaaagatattatagaa
tctaagaatagagataatgctggacatacagcagatagtaaaggattgtttttgaaaaaa
gtatattattag
DBGET
integrated database retrieval system
