Thioclava electrotropha: AKL02_004970
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Entry
AKL02_004970 CDS
T06997
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tec
Thioclava electrotropha
Brite
KEGG Orthology (KO) [BR:
tec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tec03032
]
AKL02_004970
03400 DNA repair and recombination proteins [BR:
tec03400
]
AKL02_004970
Enzymes [BR:
tec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AKL02_004970
DNA replication proteins [BR:
tec03032
]
Prokaryotic type
DNA Topoisomerases
AKL02_004970
DNA repair and recombination proteins [BR:
tec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AKL02_004970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
QPZ90301
LinkDB
All DBs
Position
complement(1001365..1002369)
Genome browser
AA seq
334 aa
AA seq
DB search
MKDLPDLVYYPDDRPGITRRRCGRGFSYMAPDGTTIARGTERKRIEALAVPPAYEDVWIC
PRQNGHLQATGRDARARKQYRYHPDWTEFRSQRKFNRLAEFGTVLPRLRRAILSDLRGHD
PGDRAFALAAVLALLDRAAIRVGNADYARENRSFGATTLRGAHMTLDGGTLRLAFTGKGG
TKIESELRDRTLERALTQLDDLPGAELITWIDEDGDPHSVRSDEVNAFLADRTGAEGLTA
KTFRTWNGSAAALEAALRQADGGRVTIKAMAEAASERLHNTPTIARNSYIHPKVIALTEA
EPEALVALAQTAPAVDGLRKAEAQLLHLLDRGTR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgcccgatctcgtctattatcccgatgaccggcccggcataacgcgcagg
cgctgcgggcgcgggttttcctatatggcccctgacgggacgaccatcgcgcgcggcacc
gagcgcaaacggatcgaggcactggccgtgccgcccgcctatgaagatgtctggatttgc
ccgcggcagaacggccatctgcaggcgacgggccgcgacgcgcgggcgcgcaagcaatat
cgctatcacccggactggaccgagtttcggtcgcagaggaagttcaaccggctcgcggaa
ttcggcaccgtcctgccgcgtctgcgccgggcaatcctgagcgatctgcgcggccatgac
cccggggatcgggccttcgcgctggccgcagttctcgctctgctggaccgcgccgcgatc
cgcgtcggaaatgccgattacgcgcgcgagaaccgcagcttcggcgcgaccacgctgcgc
ggcgcgcatatgacactcgacggcggtacgctgcggctggccttcaccggcaagggcggc
acgaagatcgaaagcgagctgcgcgacaggacgttggagcgcgcgctgacgcagctcgac
gatctgcccggggccgagctgatcacctggatcgacgaggatggcgacccccattcggtg
cgctcggacgaggtgaacgctttcctcgccgaccgtaccggggccgaggggctgaccgca
aagaccttccgtacgtggaacggctcggcggcggcgctggaggccgcactgcgtcaggcg
gatggcgggcgggtgacgatcaaggcgatggcagaggccgcctctgagcgactgcacaac
acgcccacgatcgcgcgcaactcctacatccatccgaaggtgatcgcgctgaccgaggcg
gagccggaggcgcttgtcgctcttgcgcaaaccgcgcccgcggtcgacgggctgcgcaag
gccgaggcgcagctactgcatcttctcgaccgcggcacgcgctga
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