Thioclava electrotropha: AKL02_005600
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Entry
AKL02_005600 CDS
T06997
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tec
Thioclava electrotropha
Pathway
tec03030
DNA replication
tec03410
Base excision repair
tec03420
Nucleotide excision repair
tec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKL02_005600 (polA)
03410 Base excision repair
AKL02_005600 (polA)
03420 Nucleotide excision repair
AKL02_005600 (polA)
03440 Homologous recombination
AKL02_005600 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tec03032
]
AKL02_005600 (polA)
03400 DNA repair and recombination proteins [BR:
tec03400
]
AKL02_005600 (polA)
Enzymes [BR:
tec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AKL02_005600 (polA)
DNA replication proteins [BR:
tec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AKL02_005600 (polA)
DNA repair and recombination proteins [BR:
tec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AKL02_005600 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKL02_005600 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QPZ90416
LinkDB
All DBs
Position
1132455..1135280
Genome browser
AA seq
941 aa
AA seq
DB search
MAFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLWKYIEDAKGSDAP
THAAVIFDKGSHTFRNDLYDQYKANRDEMPEELRPQIPLTREATKAFNIACEELAGYEAD
DIIATLARQGREAGGRVTIISSDKDLMQLVGGGVEMFDAMKNRAIGVEEVEAKFGVGPER
VIDVQALAGDSVDNIPGAPGIGVKTAALLINEYGDLDTLLERASEIKQPKRRETLIEKAD
QIRLSKRLVTLDDQTPIEFTLDDLEIREPDVDTLMGFLNEMEFRTLTRRVAEKFGAEPPA
APEVSDVPASHDNATPEVEQPPFDPDSYICIRDAETLTQWLDEARAKGWVAVDTETTSLN
EMQAELVGVSLAIEAGKAAYLPLGHSKGEGDLFGGAERAEGQMDLKEALALLKPVLEDPA
ILKIGQNMKYDFKIFARHGIRVAPIDDTMLMSYAMFSGLHGHGMDALSDRYLNHQPIPIK
ELIGSGKSQITFDKVEIDKATRYAAEDADITLRLWQQFKPRLHREQVTTVYETLERPMVP
VLADMEMAGVKVDASVLSRMSNAFAQKMAQLEDEIAEIAGQPFNVGSPKQLGEILFDTMG
VEGGKKGKTGAYGTGADVLEDVTTMEDTNPQAAKLAARVLDWRQISKLKSTYTDALQTHV
NPDTGRVHTSYSIAGANTGRLASTDPNLQNIPVRSEEGRRIREAFVARDGCKIVSLDYSQ
IELRILAHVADLPEMREAFKDGLDIHAATASEMFDVPLDQMTPEIRRQAKAINFGVIYGI
SGFGLARNLRIPRAEAQGFIDRYFERFPGIRKYMDDTVAFAKEHKFVQTLFGRKIHTPDI
GAKGPSAGFAKRAAINAPIQGAAADIIRRAMVRMPEAIEGIPARMLLQVHDELIFEVEEA
AIDDLIKTARATMEGAAEPVMKLSVPLVVDAGQGDSWAAAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcattcggcaaaggctgtcacctgcatcttatcgacggttcggccttcattttccgc
gcctatcacgcgctgccgccgctcacgcgcaagtccgacgggctgccgatcggggcggtc
gcgggcttttgcaacatgctgtggaagtacatcgaagacgccaagggctcggacgcgccg
acccatgcggcggtgatcttcgacaagggcagccacaccttccgcaatgacctctacgat
caatacaaggccaatcgcgacgagatgcccgaggaactgcgcccgcagatcccgctgacc
cgcgaggcgaccaaggccttcaacatcgcctgcgaggagctggcgggatacgaggccgac
gatatcatcgcgacgctcgcccgtcagggccgcgaggcgggcggccgcgtgacgatcatc
tcttccgataaggacttgatgcagctcgtcggtggcggggtcgagatgttcgacgcgatg
aagaaccgcgccatcggcgtcgaggaggtcgaggccaagttcggcgtcggccccgagcgc
gtgatcgacgtgcaggcgctggcgggcgactcggtcgacaacattcccggtgcgcccggc
atcggcgtgaagaccgcggcgcttctcatcaacgaatatggcgatctggacacgctgctg
gagcgcgcctccgagataaagcaacccaagcgtcgcgagacgctgatcgagaaggccgac
cagattcgcctctcgaagcggctggtgacgctcgacgatcagacccccatcgaattcacg
ctcgacgatctggaaatccgcgagccggatgtcgacacgctgatgggcttcctcaacgag
atggaattccgcacgctgacccgccgcgtggccgagaaattcggtgccgagccgccggcc
gcgcccgaggtctcggacgtgcccgccagccatgacaacgctacgcccgaggtcgagcag
ccgcccttcgatcccgacagctatatctgcatccgcgatgccgagacgctgacgcaatgg
ctcgatgaggcccgcgccaagggctgggttgcggtcgataccgagacgacctcgctcaac
gaaatgcaggccgaactggtcggcgtatcgctcgccattgaggcggggaaagcggcgtat
ctgccgctcgggcatagcaaaggcgaaggcgatctcttcggcggagccgagcgcgccgag
gggcagatggacctcaaagaggctctcgcgctgctcaagcccgtgctcgaggatcctgcg
atcctcaagatcgggcagaacatgaagtatgacttcaagatcttcgcccgccacggcatc
cgcgtcgcgcccatcgacgacacgatgctgatgtcctacgcgatgttctcggggctccac
ggccatgggatggatgcgctttcggatcgctacctcaaccaccagccgatcccgatcaag
gaactgatcggctccggcaagagccagatcaccttcgacaaggtcgagatcgacaaggcc
acgcgctacgccgccgaggatgccgatatcacgctgcgcctctggcagcagttcaagccg
cggctccatcgcgaacaggtcaccaccgtctatgagacgctggagcgcccgatggtcccg
gtgctcgccgatatggaaatggccggcgtgaaggtcgacgcctcggtgctgtcgcgcatg
tcgaacgccttcgcgcaaaagatggcgcagctagaggacgaaatcgccgagatcgcgggc
cagcccttcaatgtcggctcgccgaaacagctgggcgagatcctgttcgacacgatgggc
gtcgagggcggcaagaagggcaagaccggcgcctatggcaccggggcggacgtgctcgaa
gacgtgaccacgatggaggacaccaacccgcaggctgcgaagctggcggcgcgggtgctc
gattggcggcagatctcgaagctgaaatcgacctatacggatgcgctgcaaacccatgtg
aacccggatacgggccgcgttcacacctcctattctatcgcgggcgcgaataccgggcgt
ctggcttcgaccgatccgaacctgcagaacatccccgtgcgctccgaggaaggccgccgc
atccgcgaggcgtttgtcgcgcgcgacggctgcaagatcgtctcgctcgactatagccag
atcgagctgcgcatcctcgcccatgtcgcggatcttcccgagatgcgcgaagcgttcaag
gacggcctcgacatccacgcggccaccgcgtcggagatgttcgatgtgccgctggatcag
atgacgcccgaaatccgccgtcaggcgaaggcgatcaatttcggggtgatctacgggatt
tcgggctttggtctcgcgcgcaacctgcgcatcccgcgcgccgaggcgcagggctttatc
gaccgctatttcgagcgtttccccggtatccgcaaatacatggacgacaccgtggccttc
gccaaagagcacaaattcgtccagaccctgttcgggcgcaaaatccacacgcccgatatc
ggcgcgaagggaccgtcggcgggcttcgccaagcgcgccgcgatcaacgcgccgatccag
ggggcagcggccgatatcatccgccgcgcgatggtgcggatgcccgaggcgatcgaaggc
atccccgcgcggatgctgctacaggtgcatgacgaattgattttcgaggtcgaggaggct
gcgatcgacgacctgatcaagaccgcccgtgccacgatggaaggcgcggcggaacctgtg
atgaaactctcggtgccgctggtcgtcgatgcggggcagggcgatagctgggccgccgct
cactga
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