Thioclava electrotropha: AKL02_011690
Help
Entry
AKL02_011690 CDS
T06997
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tec
Thioclava electrotropha
Brite
KEGG Orthology (KO) [BR:
tec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tec03016
]
AKL02_011690 (thpR)
Enzymes [BR:
tec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AKL02_011690 (thpR)
Transfer RNA biogenesis [BR:
tec03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AKL02_011690 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Acb1
Motif
Other DBs
NCBI-ProteinID:
QPZ91493
LinkDB
All DBs
Position
complement(2453940..2454512)
Genome browser
AA seq
190 aa
AA seq
DB search
MRSFVAIELPEAHVEAIERLQQALGAGRIVQPENLHLTLAFLDEIDAGQLEALDEGLRAI
DWAPGPEVVLAGLEIFGSAARPEALVLGVQADPNLDRWHRAVMGAARLAEIDLPRRRFRP
HVTLSRFGKRASPGDLLRLGRLMAAEGAVKLPAFTPEQVALIQSTLGHGPPRHDVLMRYP
DEKSVQFAKT
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagtttcgtcgcgatcgagctgcccgaggcgcatgtcgaggccatcgagcggttg
cagcaggctctgggtgcgggccggatcgtgcagcccgagaacctgcatctgacgctggcc
tttctcgacgagatcgacgcaggccagctcgaggcgctggacgaggggctgcgggccatc
gactgggcgcccgggccggaggtggtgctggcggggctggagattttcggcagtgccgcg
cgaccggaggcgctggtgctgggcgtgcaggccgatcccaacctcgaccgttggcaccgc
gcggtgatgggcgccgcgcgtctggcggagatcgacctgccgcggcggcggtttcgtccg
catgtcaccctgtcgcggttcggcaagcgcgcatctccgggggatttgctgcggctgggg
cgactcatggcggcggaaggcgctgtgaagctgcccgctttcacgcccgagcaggtggcg
ttgatccagtccacgctgggacacgggccgccgcggcatgacgttttaatgcgctatccg
gatgaaaaatctgtgcaattcgcgaagacctga
DBGET
integrated database retrieval system
