Thioclava electrotropha: AKL02_014090
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Entry
AKL02_014090 CDS
T06997
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tec
Thioclava electrotropha
Pathway
tec03410
Base excision repair
tec03430
Mismatch repair
tec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AKL02_014090 (recJ)
03430 Mismatch repair
AKL02_014090 (recJ)
03440 Homologous recombination
AKL02_014090 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tec03400
]
AKL02_014090 (recJ)
DNA repair and recombination proteins [BR:
tec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AKL02_014090 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AKL02_014090 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AKL02_014090 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QPZ91911
LinkDB
All DBs
Position
2952417..2954159
Genome browser
AA seq
580 aa
AA seq
DB search
MSSFLSVEQSLTGRRWIGPTPEADRLAEAMAQQTRLPLPLARILVARGVTPEESEGFLEP
TIRELLPDPRSLRDMEQAAARFLKAVKAGEKIAVFADYDVDGGSSAALLINWLRAMGREA
TLYIPDRIDEGYGPNVPAMESLGAEHPLIVCVDCGTLSHEPVAAAKPADVVILDHHLGGE
TLPPALAVVNPNRQDETGELGHLCAASVVFLMLVEANRQLRDEGVQGPPLMTLLDLVALA
TVADVAPLTGCNRALVRQGLKIMARRERPGLVALSDVARLDRAPAAYHLGFVLGPRINAG
GRIGAADLGARLLSTTDPHEAQSIADRLDQLNTERREVENAVREAALSQAEERGLNAPLV
WAAGAGWHPGVVGIVAARLKEATNRPSVVIGVEGGIGKGSARSVAGVDIGAAIQRVAAEG
LLLKGGGHKMAAGLTVEEDKLEPAMARLSELLAKQGAGEIGPRDLRLDGMLMPGAATPQL
IEDLDRAGPFGQGAPAPRFAFADMEVVGARRIGESHLRFNFGDGMGGRIEAICFGAFDGP
LGPALSQPGAQRFHLAGRLEINTWGGRNKVQLRLEDAAEA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtttcctttccgtcgagcaatccctgacaggccgccgctggatcggccccaca
cccgaggctgaccggctggccgaagcgatggcgcagcagacgcgcctgcccctgccgctc
gcccgcatcctcgtcgcgcgcggcgtgacgccggaggagagcgagggcttcctggaaccc
acgatccgcgagttgctgcctgatccgcgatccttgcgcgacatggagcaggcagccgcg
cgcttcctgaaagcggtgaaggccggcgagaagatcgcggtcttcgcggattacgacgtc
gatggcggatcctcggcggcgctgctgatcaactggctgcgcgcaatggggcgcgaggcg
acgctctatattcccgaccggatcgacgagggctacgggccgaacgtgcccgcaatggag
agcctcggcgccgagcatccgctgatcgtctgcgtcgattgcggcacgctgagccacgag
cctgtggccgccgcgaaacccgccgatgtcgtcattctcgaccaccacctgggcggcgag
accctgccgccggcgctggccgtggtgaacccgaaccgtcaggacgagaccggcgagctt
ggccatctctgcgccgcctcggttgtcttcctgatgctggtggaggcgaaccggcagctg
cgtgacgaaggcgtgcaaggcccgccgctgatgacgcttctcgatctggtcgcgctggcg
actgtggccgatgtggccccgctcacgggctgcaaccgggcgctggtgcgtcaggggctc
aagatcatggcccggcgcgagcggcccggcctcgtggcgctgtcggacgtggcgcggctc
gatcgcgcgcccgccgcctatcatctgggcttcgtgcttggcccgcggatcaatgcgggc
ggacggatcggcgccgccgatctgggcgcgcggctactgtcgacaaccgacccgcacgag
gcgcaatccattgcggaccggctcgaccagctcaacaccgagcgcagagaggtcgagaac
gccgtgcgtgaagccgcactgagccaggccgaggagcgcgggctgaatgcgccgctggtc
tgggccgcgggtgcgggctggcatccgggcgtcgtgggcatcgtggccgcgcggctaaaa
gaggcgaccaaccgcccctcggtcgtgatcggcgtggagggcgggattggcaaaggctcg
gcccgctcggtcgcgggtgtcgatatcggggccgcgatccagcgcgttgccgctgagggg
ctgctgctgaaaggcggcgggcacaagatggccgcgggccttacggtcgaggaagacaag
ctggagcccgcgatggcgcgcctgtctgagcttctggccaaacagggcgcgggcgaaatc
ggaccgcgcgacctgcgcctcgacgggatgctgatgccgggcgccgcgacgccgcagctg
atcgaagatctggatcgcgctggccccttcggccagggcgcacccgctcctcgtttcgcc
ttcgcagatatggaagtcgtgggcgcgcgccggatcggggaaagccacctgcgcttcaat
ttcggcgacggtatgggcggtcggatcgaggcgatctgcttcggcgcgttcgacggcccg
ctcggccccgcgctgagccagccgggcgcgcagcgcttccacctcgccgggcggctggag
atcaacacatggggtgggcgcaacaaggtgcagctgcgcctcgaagacgccgccgaagcg
taa
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