Thioclava electrotropha: AKL02_015415
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Entry
AKL02_015415 CDS
T06997
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tec
Thioclava electrotropha
Pathway
tec03030
DNA replication
tec03430
Mismatch repair
tec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKL02_015415 (dnaE)
03430 Mismatch repair
AKL02_015415 (dnaE)
03440 Homologous recombination
AKL02_015415 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tec03032
]
AKL02_015415 (dnaE)
03400 DNA repair and recombination proteins [BR:
tec03400
]
AKL02_015415 (dnaE)
Enzymes [BR:
tec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AKL02_015415 (dnaE)
DNA replication proteins [BR:
tec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AKL02_015415 (dnaE)
DNA repair and recombination proteins [BR:
tec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AKL02_015415 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
BAT
tRNA_anti_2
DUF655
Motif
Other DBs
NCBI-ProteinID:
QPZ92135
LinkDB
All DBs
Position
complement(3255749..3259249)
Genome browser
AA seq
1166 aa
AA seq
DB search
MTSPRFIHLRVHTEYSLLEGAVPAKKLVKMCESAKMPAVAVTDTNNMFAALEFSVTATGA
GLQPIVGCQVSLEFDPAKPGERPRLPAPIVLLAQTERGYENLMKLNSCLYLDKHGALIQV
TLEELERYSEGLICLSGGPDGPVGRLIRNGAKDRAKALLQQLAGIYPNRLYVELQRHPGE
GGTLTEAEIATERPFVEWAYELGLPLVATNDVYFPKPAIYEAHDAMICIAEGAYVDQIEP
RRRLTPQHYFKSEGEMVALFADLPEAVENTVEIAKRCAFSTYKRAPILPKFADDEVEELR
RQAWDGLRNRLDVIPHAAPVEDYEKRLQFELDIIEQMGFPGYFLIVADFIKWAKDHDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIQYV
QNKYGREKVGQIITFGALLSKAAVRDVGRVLQMSYGQVDKLSKLIPVEGVKPVSIEKALA
DEPRLREAARNEEVVARLLDYAKAIEGLLRNASTHAAGVVIGDRPIDELVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIRSAMELIFKSGRPLHVDAAGNQLYEPAEGAE
NHINAIPLDDEKTYKLYADAKTVAVFQVESEGMKSALRQMKPTCIEDIVALVALYRPGPM
ENIPTYCEVKNGLKKITSVHPTIDHILEETQGIIVYQEQVMQIAQVMGGYSLGGADLLRR
AMGKKIKEAMDAERPKFEAGAAKNGVDKKKASEVFDLLEKFANYGFNKSHAAAYAVVSYY
TGWLKANHAVEFMGGVMNCDIHLTDKLAIYADEVQKKLGIEIIPPCVNRSLSTFDVVDQK
LVYALGALKNVGVDAMQMIVTARGDEPFKDLFDFARRVDMKRVGKRPLEMLARAGAFDLL
DPNRKRVFESLESLMAWSGAVIEARESAQVSLFGEAGDDLPPPRLADTDDWLPGERLAEE
HKAIGFYLSGHPIEDYLPALKRKKVLSWEEVQQKAVGGPFVTKIAGEVASVREKKSAKGN
RFAFVALSDASGPYEVAFWSEALEACRDVLETGNLLVLTVKVEVDGESVRMVATSAQTVE
KATADAGSSGLLVHIDNNDAVASVASLVERVAREGKVHSRGPISFMVYDNERGCRYQITA
MPEAPVNAQVKGALRSLRGVSEVEEV
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcccccgattcattcatctgcgcgtccataccgagtattccctgctcgaaggc
gctgtgcccgccaagaaactcgtgaagatgtgcgagtcggcgaagatgcccgccgtcgcc
gtgaccgacacgaacaacatgtttgcggcgctcgagttttccgtgaccgcgacgggggcg
gggctgcagccgatcgtcggctgtcaggtctctctggaattcgatccggccaagccgggc
gagcgtccacgcctgcccgcaccgatcgtgctgctggcccagaccgagcgcggctacgag
aacctgatgaagctgaactcgtgcctctatctcgacaagcacggggcgctgattcaggtc
acgttggaagagctcgagcggtattccgaggggctgatctgtctttcgggcggccccgac
ggcccggtcgggcggctgatccggaacggggcgaaggaccgcgccaaggcgctgctgcaa
cagctggccgggatctacccgaaccgcctctatgtcgaattgcagcgtcacccgggcgag
ggcggcacgctgaccgaggcggagatcgcgaccgagcggcccttcgtcgaatgggcctat
gagctgggtctgccgctggtcgccacgaacgacgtctatttcccgaagcccgcgatctac
gaggcccatgacgcgatgatctgtatcgcggaaggcgcctatgtcgatcagatcgagccg
cgccggcgtttgaccccacagcactatttcaaatccgaaggcgagatggtcgcgctcttc
gccgatctgcccgaagctgtggagaacaccgtcgagatcgcgaaacgctgcgctttctcg
acctacaagcgcgcgccgatcctgccgaaattcgcagatgacgaggtggaggaactgcgg
cgtcaggcatgggacgggttgcgcaaccgtcttgacgtgatcccgcatgcagccccggtc
gaagattacgagaaacgtctgcaattcgagctcgatatcatcgaacagatgggcttcccg
ggctacttcctgatcgttgccgacttcatcaaatgggccaaggatcacgacattccggtc
gggccggggcggggctcgggtgcgggttcgctcgtggcttacgcgttgaccattaccgac
cttgatccgctgcgctattcgctgctgttcgaacgcttcctcaaccccgaacgtgtctcg
atgccggacttcgacatcgacttctgcatggatcgccgcgaggaggtgatccaatacgtt
cagaataaatacgggcgcgagaaggtgggccagatcatcaccttcggtgcgcttctgtcc
aaggccgccgtgcgcgacgtgggccgggtcttgcagatgtcctacgggcaggtcgacaag
ctgtcgaagctgatcccggtcgagggcgtgaagcccgtcagcatcgagaaggcgctggcc
gacgagccgcgtctgcgcgaagcggcccgcaacgaagaggtcgtggcgcggcttctcgat
tatgcgaaagccatcgaaggtctgctgcgcaacgcttcgacccacgcggcgggcgtcgtg
atcggcgaccgtccgatcgacgagctggtgccgctctatcaggatccgcgttcggacatg
cccgcgacccagttcaacatgaaatgggtcgagcaggcgggtctggtgaagttcgacttc
ctcggcctgaagacgctgacggtgatccgctctgcgatggagctgatcttcaaatcgggc
cgcccgctgcatgtcgatgccgccggcaaccagctctacgagcctgccgagggcgcggag
aaccatatcaacgcgatcccgctggatgacgagaagacctacaagctttacgccgatgcg
aagaccgtcgcggtgttccaggtggaatcggaaggcatgaaatcggccctgcgccagatg
aagcccacctgtatcgaggacatcgtcgcgctcgtggcgctgtatcgtcccggcccgatg
gagaacatcccgacctactgcgaggtgaagaacgggctcaagaagatcacctcggtccac
ccgaccatcgaccatatcctcgaagagacccaaggcatcatcgtctatcaggagcaggtg
atgcagatcgcgcaggtcatggggggctactcgcttggcggcgcagaccttcttcgccgc
gcgatgggtaagaagatcaaggaggcgatggacgccgagcgcccgaaattcgaggcgggc
gcggccaagaacggggtcgacaagaagaaggcctcggaggtgttcgaccttctggagaaa
ttcgcgaactacggcttcaacaaatcccacgcggcggcctacgcggtggtgtcctattac
accggctggctgaaggcgaaccacgcggtcgagttcatgggcggcgtgatgaattgcgat
attcatctgaccgacaagctcgcgatctatgccgacgaggtgcagaagaagctcgggatc
gagatcatcccgccttgcgtgaaccgctcgctttcgaccttcgacgtggtcgatcagaag
ctggtctatgcgctgggcgcgctgaagaacgtcggcgtggacgcgatgcagatgatcgtg
accgcgcgcggcgacgagcccttcaaggacctgttcgatttcgcgcggcgcgtggacatg
aagcgggtgggcaagcgcccgctggagatgctggcgcgggcaggggccttcgatctgctc
gatccgaaccgcaaacgcgtcttcgagtcgctggaatcgctgatggcgtggtcgggcgcg
gtgatcgaggcgcgcgagtcggcgcaggtgtcgctgttcggcgaggcgggcgacgatctg
ccgccgccgcgtctggccgataccgacgactggctgccgggcgaacgtctggccgaagaa
cacaaggccatcggcttctacctctcgggtcacccgatcgaggattacctgcccgcgctc
aagcgcaagaaggtgctgagctgggaagaggtgcagcaaaaggccgtgggcggtcctttc
gtgaccaagatcgcgggcgaggtcgcctcggtgcgcgagaagaaatccgccaagggcaac
cgcttcgccttcgtggcactctcggatgcgtcggggccttatgaggtcgccttctggtcc
gaggcgctggaagcctgccgcgacgtgctcgagactggcaaccttctggtgctgaccgtg
aaggtcgaggtcgacggcgagtcggtgcgtatggtcgccacttcggcccagaccgtggag
aaggcgacggcggatgcggggtcatccgggcttctggtgcatatcgacaacaatgacgcg
gtcgcctcggtcgcgagcctcgtcgagcgggtcgcccgcgaagggaaggtccattcgcgc
ggcccgatcagcttcatggtctatgacaatgagcggggctgccgctaccagatcaccgcg
atgcccgaggcgccggtcaacgcgcaggtgaaaggcgcgctgcgctccttgcgcggggtg
agcgaggtcgaggaggtctga
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