Thioclava electrotropha: AKL02_016475
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Entry
AKL02_016475 CDS
T06997
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tec
Thioclava electrotropha
Pathway
tec03030
DNA replication
tec03430
Mismatch repair
tec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKL02_016475
03430 Mismatch repair
AKL02_016475
03440 Homologous recombination
AKL02_016475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tec03032
]
AKL02_016475
03400 DNA repair and recombination proteins [BR:
tec03400
]
AKL02_016475
Enzymes [BR:
tec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AKL02_016475
DNA replication proteins [BR:
tec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AKL02_016475
DNA repair and recombination proteins [BR:
tec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AKL02_016475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
PAS_4
PAS_8
Motif
Other DBs
NCBI-ProteinID:
QPZ92327
UniProt:
A0ABX6YXV3
LinkDB
All DBs
Position
complement(3484456..3486552)
Genome browser
AA seq
698 aa
AA seq
DB search
MDLTRLSLRTRVFLFFAALALGNLVALVAGLWFGFTRLGDPELLNAMVIGGAVAGFVILG
LIAWIWFLFDENVAKPIERLSGMLRARTTAEIEGDMDADIARYLGDLAPAAASVTRHLSE
TRNALTEAVQRETTRLAQEKERLEALLSDVPVGVLLCTADHQLAFYNGQAVELLGSAHAP
GLDRRVFDYLNQPPIAHAYDRLLATEDPDAASDLLCSTKAEGRVLAARMRLLSEGEDHHL
SARPGYVLTLRDVSGDMASHAQREQLMDELFDRIRRPAAALQSLIGVLTADDGPAPGPER
DRVREAANSEAHHLSAAIHEFFERHEANRADWWPLAMIRASDLGQAVAARVTAEGGAILP
VTAGLMLRCEGFEMVALLAGLVRKLTGRRGFRLEITEDGPGALIALEWEGAPVPISELER
WLDQPLDVGLEDVTGHRVLTTHAAEIWPEKLGDTRARLCIPLREARHVTKRPKPVPRAVV
YDFELLARERVAEIADTPLTDLTYVVFDTETTGLLPTEGDEIVQIAAVRIVNGRRIDTEV
FDTLVDPKRSIPPGSTEVHGISNAMVEGAPDIAKVGRDFHRFAEGAVLIAHNAPFDMEFL
HRKEVAIGERFDHPILDTVLLSAVVFGQSESHTLDALTHRLGITIPEEARHTAIGDTVAT
ADAFLKMLPALQARGLRTFGELVAELRKHGRLIKDLNG
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggacctcacccggctttccctgcgcacccgggtgtttctgttctttgccgccttggcg
ctcggcaatctggtggcgctggtggcggggctgtggttcggcttcacccgtctgggcgac
cctgagcttctgaatgcgatggtgatcggcggcgcggtcgcgggcttcgtgatcctcggg
ctgatcgcctggatctggtttctcttcgacgagaacgtggccaagccgatcgagcggctc
tcggggatgctgcgcgcccgcaccacggccgagatcgagggcgatatggacgccgatatc
gcgcgctatctgggcgatcttgcccccgctgcggcctcggtcacgcgccacctgtcggag
acccgaaacgccctgaccgaggccgtgcagcgcgagaccacccggctcgcgcaggaaaag
gaacggctcgaggcgctcttgtcggatgtgccggtgggcgtgctgctctgcaccgcggat
catcagcttgccttctataacgggcaggcggtggagcttctgggctcggcccatgcgccg
gggctggatcggcgcgtcttcgactatctcaaccagccgcccatcgcccatgcctatgac
cggcttctggcgacggaagatcccgacgcggcctcggacctgctctgttcgacgaaggcg
gagggccgggtgctcgccgcccggatgagattgctgtcggagggagaagatcaccatctg
agcgcgcgcccgggctacgtgctgacgctccgcgacgtctcgggcgacatggcctctcat
gcgcagcgcgagcagttgatggacgagctgttcgaccgcatccgccgccctgccgcagcc
ctgcaatcgctgatcggtgtgctgaccgccgatgacggccccgcgccgggccccgagcgg
gaccgggtgcgcgaggccgccaattccgaggcccatcacctctccgccgcgatccacgaa
ttcttcgagcgccacgaggcgaaccgcgccgattggtggccgctggcgatgatccgcgcc
tccgatctgggtcaggcggtggccgcgcgggtgaccgccgagggcggggcgatcctgccg
gtgaccgcggggctgatgctgcgctgcgagggcttcgagatggtggccctgctggcgggg
ctggtgcgcaagctgacagggcgccgcggcttccggctggagatcaccgaggacggcccc
ggcgcgctgatcgcgctggaatgggaaggcgcgccggtcccgatctccgagctggagcgc
tggctcgatcagccgctcgatgtcgggctggaggacgtcaccgggcatcgcgtgctgacc
acccatgccgccgaaatctggcccgagaagctgggagacacgcgtgcgcggctctgcatc
ccgctgcgcgaggcgcgccatgtcaccaagcgcccgaagccggtgccgcgcgcggtggtc
tacgatttcgaactgcttgcgcgcgagcgcgtggccgagatcgccgatacgccgctgacc
gatctgacctatgtcgtcttcgacaccgagaccacgggcctgctgcccaccgagggcgat
gagatcgtgcagatcgccgccgtgcgcatcgttaacgggcggcggatcgataccgaggtc
ttcgatacgctcgtcgatcccaagcgctcgatcccgcccggctcgaccgaggtgcacggc
atctcgaacgcgatggtcgaaggggcgccggacattgcgaaggtcgggcgcgatttccac
cgcttcgccgagggcgcggtgctgatcgcgcataacgcgcctttcgacatggaattcctg
catcgcaaggaggtggcgatcggcgaacggttcgatcacccgatcctcgacacggtgctg
ctgtcggcggtggtgttcgggcaatccgagagccacacgctcgacgcgctgacccatcgc
ctcggcatcaccatccccgaggaggcgcgtcacaccgcgatcggcgacacggtcgcgacg
gcggatgccttcctgaagatgctcccggcgctgcaggcgcggggcttgcggaccttcggc
gaattggtggccgagcttcgtaagcacgggcgactgatcaaggatctgaacgggtag
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