Thioclava electrotropha: AKL02_018980
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Entry
AKL02_018980 CDS
T06997
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tec
Thioclava electrotropha
Brite
KEGG Orthology (KO) [BR:
tec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tec03016
]
AKL02_018980 (truB)
Enzymes [BR:
tec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AKL02_018980 (truB)
Transfer RNA biogenesis [BR:
tec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AKL02_018980 (truB)
Prokaryotic type
AKL02_018980 (truB)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QPZ92774
LinkDB
All DBs
Position
complement(3984836..3985738)
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AA seq
300 aa
AA seq
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MARKKGRDISGWLIVDKPADITSTSVVNKVRWALGAKKAGHAGTLDPAATGVLAVALGEA
TKTVPFITDALKCYRFQVRLGAATKTDDAEGDVIETSDLRPTDEEIAAALPSFVGDIEQV
PPQFSAVKVDGERAYALARAGEEMELAARPLYVESLVMLGRPDADTVELELVCGKGGYVR
SIARDLGQKLGCLGHVLWLRREWSGPFEASDGITLEEIEELAKTPELDEKLLPVELGLDD
LPQLKATPEGAVRLKNGNPGMVLPGEAEWGEEVWVSHDGKPLAVGIYKSGEVHPSRVFNL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaagaagggtcgcgacatttccggctggctgatcgtggacaagcccgcggac
atcacctcaacctcggtggtgaacaaggtgcgctgggcgctgggcgccaagaaggcgggc
catgcgggcacgctcgacccggcggcgaccggggttctggcggtcgcgctgggcgaggcc
accaagacggtgccgttcatcaccgatgcgctgaaatgctaccggtttcaggtgcggctg
ggcgctgcgaccaagaccgacgatgccgagggcgatgtgatcgagacctccgatctgcgc
cccacggacgaagaaatcgccgccgcgctgcctagcttcgtgggtgatatcgaacaggtg
ccgccgcagttttccgccgtgaaggtcgatggcgagcgcgcctatgcgctggcccgtgcg
ggcgaggaaatggaactggccgcgcggcctctctacgtcgaaagcctcgtgatgctgggc
cgtcccgatgccgacaccgtcgagctggagctggtctgcggcaagggcggctatgtgcgc
tccatcgcgcgcgatctgggtcagaagctcggctgtctcggccacgtcctctggctgcgc
cgcgaatggtcggggcccttcgaggcgagcgacgggatcacgctggaagagatcgaagag
ctggcgaagacgcccgagctcgacgaaaaattgttgcccgtggagttgggccttgatgat
ctgccgcagctcaaggctacgcccgagggcgcggtgcggctgaagaacggcaatccgggg
atggtgctgccgggcgaggccgaatggggcgaggaagtctgggtcagccatgacggcaag
ccgcttgccgtcggtatctataaatccggcgaggtccatccgagccgcgtcttcaacctt
tga
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