Thioclava electrotropha: AKL02_019940
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Entry
AKL02_019940 CDS
T06997
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
tec
Thioclava electrotropha
Brite
KEGG Orthology (KO) [BR:
tec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tec03400
]
AKL02_019940 (addA)
Enzymes [BR:
tec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AKL02_019940 (addA)
DNA repair and recombination proteins [BR:
tec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AKL02_019940 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QPZ92943
LinkDB
All DBs
Position
complement(4176848..4180237)
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AA seq
1129 aa
AA seq
DB search
MTHPASLRQHQASQPDSSVWLAANAGSGKTKVLTDRVARMLLAGTEPQRILCLTYTKAAA
AEMQNRLLGLLGGWAMMDEAKLREKLRALGADEALSAEDLAKARRLFAKAIETPGGLKIQ
TIHAFCAGLLRRFPLEAKVSPGFSEMDDRAGELMREDILEEIATGPDCDRLDALLGVYSG
EDLTSLAADISRNRVGFAGDLGLPDLLEAYDLPRDMTEEALLSEVFDDGDLKMIREVAPA
FLASSKNDQRVGAGLAAARTRDLDAVQALEDVLCVKKPKDGPPYQPKLDKVATKALAKSL
GDGTMAALSDLSERVSENRPRRLAFVAAKRAHALHRFAQVFLPRLDAYKAARGWLDFDDL
IDRAAALLDEPSVAQWVLFRLDGGIDHILVDEAQDTSPRQWRVIERIAEEFTSGEGAHKG
ERTLFVVGDRKQSIYSFQGADLQQFEEMRAHFARKFADIGRALSPLELEHSFRSSAAVLR
SVDLAFARGAEQGLGGAPSHIAFHEALPGRVDLWPAIEAVKTDDEDDWESPVDLTSAESA
ISQLSRMIAAEISAMIAQGVQIPDHEAPGGARPVHEGDFLILVRRRSELFSEIIRACKSI
GLAVAGADRLKLGAELAVRDIRSLLSFLATPEDDLSLAEALRSPLLNWSEQELYQLAQPR
KGYLWEALRRGEMRRDTQEMLKDLRDNSDFLRPFELIERLLTRHGGRERLLARLGPEAED
GIDELISQALAFERNEVPSLTGFLGWLDADDVQVKRQLDGAGRAIRVMTVHGSKGLEAPI
VILPDTAKKKEPNPPKILRLDNGVAGLRQPTTDAPEAQLSAAGKETTARTEEAQRLLYVA
MTRAEKWLIVAAAGEVGEGDETWYSRMKSGLEAAGTEDVTGLSKPLQELGEFPRHATGAW
PENALAPAAAEEVTRLDLPAWSLTLAAAVEPPPRPLSPSDLGGAKALFGGGEIMDEDEAL
RHGRNLHRLLEYLPERPRDQWEDLAELLLSEGEDVLLPGEIEPVLAEAIRVLEAPGMAAW
LGPDCLAEVEITAALEEFGGQRIHGFLDRLRIDAEGVHVLDYKSNRIVPASPDQVPEGIV
RQMAAYRAALRQIHPGSAITCAILWTQDGTIMPLADAQLDGSLRTPTVS
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgacccatccggccagcctcagacagcatcaggcctcgcaaccggacagctcggtctgg
ctcgccgcgaatgcgggctcgggcaaaaccaaggtgctgaccgaccgcgtcgcgcgcatg
cttttggcgggaacagagcctcaacgcatcctgtgcctgacctacaccaaggccgccgcg
gcggagatgcagaaccgactgcttgggctgctgggcggctgggcgatgatggacgaggcg
aagctgcgcgagaagctaagggcgctgggtgccgatgaggcgctctctgccgaggatctg
gcgaaagcgcggcggctgttcgccaaggcgatcgagacgccgggcgggctgaagatccag
accattcacgccttctgcgcggggctgctgcgccgcttcccgcttgaggcgaaagtctcg
ccgggcttttccgagatggacgaccgcgccggcgaattgatgcgcgaggatatcctcgag
gagatcgcgactggcccggattgcgaccggctcgatgcgttgctcggcgtctattccggc
gaggatctgacgtcgcttgcagccgatataagccggaatagggtcggttttgcaggcgat
ctgggcttgcccgatctgctggaagcctacgatctgccgcgggacatgaccgaagaggcg
ctgctgtcagaagtcttcgacgacggcgatctgaagatgatccgcgaggtcgcgcctgcg
tttcttgcaagctccaagaacgatcagcgcgtcggcgcaggtctggcggcggcgcgcacc
cgcgatctggacgctgtgcaggccctggaagatgtgctttgcgtcaagaaaccgaaggac
ggcccgccctatcagcccaagctcgacaaggttgccaccaaggcgctcgccaaatcgctg
ggcgacggcacgatggcggcgctgtccgacctgtccgagcgcgtctccgagaaccgtccc
cgccgtctcgctttcgtcgcggccaagcgcgcccatgcgttgcaccggttcgcgcaggtc
ttcctgccacggctcgacgcctataaggccgcgcgcggctggctcgatttcgacgatctg
atcgaccgggcggcggcgctgctggatgagccgtctgtggcgcaatgggtgctgttccgc
ctcgatggcgggatcgaccatatcctcgtcgatgaggcgcaggataccagcccccggcaa
tggcgggtgatcgagcggatcgccgaggaattcacctccggcgagggcgcgcataagggc
gaacgcacgctgtttgtggtgggcgaccgcaagcagtcgatctattccttccaaggggcc
gacctccagcaattcgaggagatgcgcgcccatttcgcccgaaaattcgcggatatcggt
cgcgcgctctctccgctggagctggagcattccttccgatcgtccgccgccgtgctgcgt
tccgtggacctcgcttttgcgcgcggggccgaacagggcctgggcggcgcgccctcgcat
atcgccttccacgaggcgcttccgggccgcgtcgatctgtggcccgcgatcgaggcggtg
aagacggatgatgaggacgattgggagagcccggtcgatctcacgagcgcggaatctgcg
atttctcagctgtcgcgcatgatcgctgccgagatttccgcgatgatcgcgcaaggcgtg
cagatcccggatcacgaggcgcccggcggcgcgcgcccggtgcatgagggcgatttcctg
atcctcgtgcggcgtcgctcggagctgttttccgagatcatccgcgcctgcaaatcgatc
gggctggcggtcgcgggggcggatcgcctgaagctcggggcggagcttgcggtgcgtgat
attcgctcgcttctcagcttcctcgcgacgcccgaggacgatctgtcgctggcggaggcg
ttgcgctcgccgcttctgaactggtccgagcaggagctctatcagctcgcgcagccccgg
aagggctatctctgggaggcgctccgccgtggcgagatgcggcgcgatacgcaggagatg
ctgaaagatctgcgcgacaattctgatttcctgcggccattcgagctgatcgaacgcctg
ctgacccggcatggcgggcgcgagcggcttctggcgcggctcggccccgaggcggaggac
gggatcgacgagctgatctcgcaggcactggcgttcgagcgtaacgaagtgcccagcctg
accgggttcctcggctggctcgatgcggatgacgtgcaggtaaaacggcagctggacggg
gcagggcgcgcgatccgggtgatgacggtccacggctcgaaagggctggaagcgccgatc
gttatcctgcccgatacggcgaagaaaaaagagcctaatccgcctaaaatcctgcgtttg
gacaatggcgtcgcgggcttgcggcagcccacgacggacgcgccggaggcccagctttcg
gctgcgggtaaggagacgactgcccgcacggaagaggcacagcggcttctctacgttgcg
atgacgcgggcggagaaatggctgattgtggccgcagccggtgaggtcggcgagggcgac
gagacttggtatagccggatgaaatcgggcctcgaagctgccgggaccgaggacgtcacg
gggctttccaagccgttgcaggagctgggcgagtttccacgccacgccacgggcgcatgg
ccggaaaacgcgctcgcgccagcggccgcagaggaggtcacgcgactggatctgcccgca
tggagcctcaccctagccgctgccgtcgagccgccgccgcgtccgctttcgccctctgat
ctgggcggggcgaaggctctgttcggcggtggcgagatcatggacgaagacgaggcgctg
cggcacggccgcaacctgcaccggctcctcgaatatctgcccgaacggccgcgcgaccag
tgggaagaccttgccgaactgctgctgtccgagggcgaggatgtgctgcttccgggtgaa
atagagcctgttttggccgaagcgatccgcgttctcgaagcgccgggcatggcggcctgg
ctgggtccggactgtctggcggaggtcgagatcaccgccgcgctggaggaattcggcggc
cagcggattcacggcttcctcgaccgtctgcggatcgatgccgaaggcgttcatgtcctc
gattacaaatccaaccgcatcgtccccgcgtcacccgatcaggtgcccgaggggatcgtg
cgacagatggccgcctatcgcgcggcattgcgccaaattcaccccggaagcgccatcacc
tgcgcgatcctgtggacacaggacggaacgatcatgccgctcgcagatgcacagctagac
gggagcttgcgcacgcccactgtatcttga
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