Terrabacter sp. C0L_2: U5C87_00445
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Entry
U5C87_00445 CDS
T09725
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ted
Terrabacter sp. C0L_2
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ted03021
]
U5C87_00445
Transcription machinery [BR:
ted03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U5C87_00445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_Crp_2
DUF1780
HTH_23
KORA
HTH_24
MarR_2
HTH_3
DUF7343
HTH_10
GDE_N
Sigma70_ECF
HTH_38
HTH_28
HTH_Tnp_ISL3
DUF134
HTH_37
MarR
Motif
Other DBs
NCBI-ProteinID:
WVM96841
LinkDB
All DBs
Position
86504..87292
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AA seq
262 aa
AA seq
DB search
MTDPSRGPRKDARTRELISTIRTSTSETERSAALETVTRLHMPLARSLAHRYSGKGLDRE
DLEQVAFLALLKAIRRFDLEQATEFGAYATPTITGELRRHFRDHGWLVRPPRGLQERRQL
VTDARTRLEQTLGHEPTQADLASALDLTLEQVKEAQVASTNLRPASLDATTTEGGRPVLD
LVDARADHQTDPGLDEGIVVRTALSRLPARDQEILELRFAHDMTQAEIAQTMGLSAMQVS
RLLRRVLAELREHLDSAELLSA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccttcgcgcggtccccgcaaggacgcccgcacccgtgagctcatcagcacg
atccgcacctcgacctccgagaccgagaggtccgcggcgctcgagacggtgacccggctg
cacatgcccctcgcccgctccctggcgcaccggtactcgggcaagggcctcgaccgcgag
gacctcgagcaggtggcattcctcgctctgctcaaggcgattcgtcgcttcgacctcgaa
caggcgaccgagttcggcgcgtatgccacgcccaccatcaccggtgagctgcgccgtcac
ttccgtgaccacggctggctcgtgcgccctccgcgcggcctgcaggagcgccgccagctc
gtcaccgacgcccgcacccgtctcgagcagacgctcggccacgagcccacgcaggccgac
ctcgcctcggcgctcgacctgacgctggagcaggtgaaggaggcgcaggtcgcctcgacg
aaccttcgaccggcctcgctcgacgcgaccacgacggagggcggtcgtcccgtgctcgac
ctcgtcgacgcgcgtgccgaccaccagaccgaccccgggctcgacgagggcatcgtcgtg
cgcaccgcgctcagccggctgcccgctcgtgaccaggagatcctcgagctgcgcttcgcc
cacgacatgacgcaggcggagatcgcccagacgatgggcctcagcgcgatgcaggtcagc
cgactgctgcgccgtgtgctcgcggagctgcgcgagcacctcgactccgctgagctgctc
agcgcctga
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