Terrabacter sp. C0L_2: U5C87_03065
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Entry
U5C87_03065 CDS
T09725
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ted
Terrabacter sp. C0L_2
Pathway
ted03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U5C87_03065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ted03400
]
U5C87_03065
Enzymes [BR:
ted01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
U5C87_03065
DNA repair and recombination proteins [BR:
ted03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U5C87_03065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF6302
Motif
Other DBs
NCBI-ProteinID:
WVM97346
LinkDB
All DBs
Position
complement(653690..654532)
Genome browser
AA seq
280 aa
AA seq
DB search
MCPAAMPNPAQHPVTGGLFLSPVPPGTGWPGDPATAETPVAATAAQVRRLAKGADGIREL
DARISVCRACPRLVEWRESVATEGRRAAFADQPYWGRPGPSFGDPDAEVLVVGLAPAANG
TNRTGRMFTGDRSGDWLYAALHRAGYASQPTSVSSGDGLELTGLRIVATVRCAPPANKPT
TEEKATCAPWLDRDLELSEPRLRSMLALGSIAWDAALGAARRRGWLVPRPKPKFGHGAEA
VLRTAAGHPVRLVGSYHVSQQNTFTGKLTEAMLDDVIGRL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtgccctgccgccatgcccaacccggcccagcaccccgtcacgggtggcctcttcctg
tcgccggtccctcccggcaccggctggcccggcgacccggctacggctgagacgccggtg
gcggccaccgccgcgcaggtgcgccggctcgcgaagggggcagacggcatacgcgagctc
gatgcccgcatcagcgtgtgccgagcctgcccgcggctcgtcgagtggcgcgagtcggtg
gcgacggagggacgccgcgcggcgttcgccgaccagccctactggggacggccgggcccg
tcgttcggcgacccggacgcggaggtgctcgtcgtcgggctggcgccggcggccaacggc
accaaccggaccgggcggatgttcaccggtgaccgctcgggtgactggctctacgccgcg
ctccaccgcgcgggctacgcgagccagccgacgtcggtctcgtcgggcgacggcctcgag
ctgaccgggcttcgcatcgtcgcgaccgtccgatgcgcgccgcctgcgaacaagcccacg
acggaggagaaggcgacgtgcgcgccctggctcgaccgcgacctcgagctgtcggagccg
cggctgcgctcgatgctcgcgctcggctcgatcgcctgggacgcggcgctcggggcggct
cgacgtcgcgggtggctcgtgccccgacccaagcccaagttcggccacggcgccgaggcc
gtgctgaggacggcggccggccacccggtgcgcctcgtcggcagctaccacgtgagccag
cagaacaccttcacgggcaagctcaccgaggcgatgctcgacgacgtcatcggccggctg
tag
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