Terrabacter sp. C0L_2: U5C87_07025
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Entry
U5C87_07025 CDS
T09725
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ted
Terrabacter sp. C0L_2
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ted03400
]
U5C87_07025
DNA repair and recombination proteins [BR:
ted03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U5C87_07025
Archaeal homologous recombinant proteins
U5C87_07025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
ABC_tran
nSTAND_NTPase5
CC4_CEP85
Rab11-FIP3
AAA_21
Motif
Other DBs
NCBI-ProteinID:
WVM98114
LinkDB
All DBs
Position
complement(1500653..1503646)
Genome browser
AA seq
997 aa
AA seq
DB search
MQLHHLSMTAIGPYAGTEVIDFTTVGRAGLFLLEGPTGSGKSTIIDAITFALYGKVAQAS
ADVERIHSHHADPRTVPVVVLVFETQSGLYRVQRTPRFERPKSRGEGTTVQQPTIKLWRL
QTPDDLEGGELLSTNIGDCDDEITRAVGLTRDQFVQTVILPQGEFATFLRARSEDKGKLL
EKVFGTAFFRRVQDEIVEAGRVAQARRQSAVDEIRLAVHALAVSAGLETERRDVLEALSR
TAPESLDAELAQVVDELTTRERHAGKASREAIETHKQMADMVSDARLRMHRRERLLQLQQ
QEHDLGKQAVAFQQLGEEVARARQARPVAGAVRTLAQSEASLKRAEAALTQARARVDAAL
RDHGPAALREAAAQAREVVGSLTGAITLEDALPARVAQLRQLRERLDGLHRSVTAVTTEL
EALPLTIATHEEALTESRRVAALLDGRAHEGERAKERLEAAVAHEAALARVPRAESVATE
ALSAVATAETALAGLRRARIDGIAGELGLSLVAGDPCPVCGSLEHPSPAHPTLDAVTPEQ
IESEEGSVVRLREQAALAAEALGNLRSEVRELAARCDGLDVATARSRAEDAARELAESMR
ARADVEAGAARLTELRDRVDTLSTQAGRLGADLARTEQSATDLEGRIAEETSVVEIARDG
HPSVTARRDDLVARAARIDALVDALGQRDVAAASVAEDTAARDADLAQFGFADVAEWMAA
DRGAEWINAKTREIAEFERACTQVRAGLTGPELADVQLDALFDDIEQLEALAAAAKKEME
AATNEHGSLRDQVTRTKRRVTDVREARARNAAVISETADAVRVSQLVAGNGDNQLNLDLA
KYVLIRRFTEVLSAANAELGRFSGGRYTLEHTDAKKGNAKSGLGVRVHDMHTNQVREVGT
LSGGETFYVSLSLALALAEVVRAESGGVDLGTLFVDEGFGTLDPDVLDDVMHTLEGLREG
GRTVGIVSHVTELKSRVADRIEVLVKPDRTSTLRITA
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
gtgcagctgcaccacctgtccatgacggccatcgggccgtatgccggcacggaggtcatc
gacttcaccaccgtcgggcgcgccggcctcttcctgctcgagggccccacgggctcgggc
aagtcgacgatcatcgacgccatcaccttcgcgctctacggcaaggtcgcgcaggcctcg
gccgacgtcgagcgcatccactcccaccacgccgacccgcgcaccgtgcccgtggtggtg
cttgtcttcgagacccagtcggggctctaccgcgtgcagcgcacgccccgcttcgagcgg
cccaagtcgcgcggcgagggcacgaccgtgcagcagccgaccatcaagctgtggcggctg
cagacccccgacgacctcgagggcggcgagctgctctcgaccaacatcggcgactgcgac
gacgagatcacccgcgccgtcggcctgacccgcgaccagttcgtgcagacggtgatcctg
ccgcagggtgagttcgcgaccttcctgcgcgcccggtccgaggacaagggcaagctcctc
gagaaggtcttcggcacggcgttcttccggcgggtccaggacgagatcgtcgaggcgggc
cgcgtcgcccaggcccggcggcagtcggccgtcgacgagatccggctcgccgtgcacgcc
ctcgccgtctcggccggtctcgagaccgagcgccgcgacgtgctcgaggccctgagccgc
accgcccccgagtccctcgacgccgagctggcccaggtcgtcgacgagctgacgacccga
gagcgccacgccggcaaggcgagccgcgaggccatcgagacccacaagcagatggccgac
atggtcagcgacgcgcggctgcgcatgcatcgccgcgagcgcctcctccagctgcagcag
caggagcacgacctcggcaagcaggcggtcgccttccagcagctcggcgaggaggtggcc
cgggctcgacaggcccggcccgtcgccggcgccgtgcgcaccttggcccagtccgaggcc
tcgctcaagcgggccgaggcggcgctgacccaagcccgtgcgcgcgtcgacgccgccctg
cgtgaccacggtcccgccgccctgcgcgaggccgcggcgcaggctcgcgaggtggtcggg
tcgctgaccggcgcgatcaccctcgaggacgcactgcccgcccgcgtcgcacagctgagg
cagctgcgcgagcggctcgacggactgcaccggtcggtgacggccgtgacgaccgagctc
gaggccctccccctgacgatcgcgacgcacgaggaggcgctgaccgagtcccgacgcgtc
gccgcgctcctcgacggacgcgcgcacgagggcgagcgagccaaggagaggctcgaggcc
gccgtcgcgcacgaggccgccctggcccgcgtgccgcgcgccgagtcggtggcgacggag
gccctgtcggcggtcgcgaccgccgagaccgccctggcagggctgcgccgagcccgcatc
gacggcatcgccggagagctagggctctcccttgtcgcgggcgacccgtgccccgtgtgc
gggtcgctcgaacacccgtcgccggcccacccgaccctcgatgccgtgacccccgagcag
atcgagtccgaggagggtagcgtcgtccgcctccgtgagcaggcggccctcgcggccgag
gccctcggcaacctccggtccgaggtgcgtgagctggcggcccggtgcgacgggctcgac
gtcgccacggcccggtcgcgcgcggaggacgcggcccgcgagctcgcggagtccatgcgg
gcgcgcgccgacgtcgaggcgggagcggctcgcctgaccgagctgcgcgaccgcgtcgac
accctctccacgcaggcaggccgcctcggcgccgacctcgcccgcaccgagcagtcggcc
accgacctcgaggggcgcatcgccgaggagacgtccgtcgtcgagatcgctcgcgacggt
cacccgagtgtcacggcccggcgcgacgacctcgtcgcccgcgccgcccgcatcgacgcc
ctcgtcgacgccctcggccagcgggacgtcgcggccgcgtcggtcgccgaggacaccgcg
gcgcgcgacgccgacctcgcccagttcggcttcgccgacgtcgccgagtggatggcggcc
gaccgtggcgccgagtggatcaacgccaagacccgcgagatcgccgagttcgagcgcgcc
tgcacccaggtccgggccggcctcaccggccccgagctcgccgacgtccagctcgacgcc
ctcttcgacgacatcgagcagctcgaggccctcgctgccgcagccaagaaggagatggag
gccgcgaccaacgagcacggcagcctccgcgaccaggtgacccgcaccaagcgacgggtc
accgacgtgcgcgaggcgagggctcgcaatgccgccgtcatctccgagaccgccgacgcc
gtgcgggtcagccagctcgtcgccggcaacggcgacaaccagctcaacctcgacctcgcc
aagtacgtcctcatccggcgcttcaccgaggtgctctcggcggccaacgccgagctcggc
cgcttctccggcggccgctacaccctcgagcacaccgacgcgaagaagggcaacgccaag
tcgggtctcggggtgcgcgtgcacgacatgcacaccaaccaggtccgcgaggtcggcacg
ctctcgggcggcgagaccttctacgtctcgctgtccctcgctctcgcgctggccgaggtc
gtgcgggccgagtccgggggcgtcgacctcggcacgctcttcgtcgacgagggcttcggc
accctcgaccccgacgtgctcgacgacgtcatgcacaccctcgagggactgcgcgagggc
ggacgcaccgtcggcatcgtcagccacgtgacggagctgaagtcccgggtcgccgaccgc
atcgaggtgctcgtcaagcccgaccgcacgagcaccctgcgcatcaccgcctga
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