Terrabacter sp. C0L_2: U5C87_09920
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Entry
U5C87_09920 CDS
T09725
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
ted
Terrabacter sp. C0L_2
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Gene cluster
GFIT
Motif
Pfam:
zf-HC2
Sigma70_r2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
WVM98666
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Position
2137945..2139816
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AA seq
623 aa
AA seq
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MSADATLWSSEAWASAPDAYLLLRTREGSAEAFGELWRRHLPAAYAVAGRHRGRSAPEDI
VAEAAARVLALIRDGRGPDEHFRAYFLSAVRTVAIDQGRRDLRVVPAEPEDLEELAEPHE
DPLAVLAADDEGLALVREAFAGLSERDQRVLWHTTVEGAAPRTVAPAMGMTANAVSARAM
RARESLRALYLDACAQRGLADADSEECRWTVEHLGALVRGRLPKRQTERAEAHVAGCPHA
AAIADDLRLVHDGFPALLVPLVLAAGLGTPGFVGVAALLGLSGGAGAAGVAGSASATGSG
PVAGGAVGTPGPVTGSAGSSAPSGASGAGSVAEVASQVTALVAGLAVTAGVAGALALPAP
SLARPSAAPVPAATTTVPAPSVTSGPGGVTAGLPGTAPGSTGQPSGALETVSASAIPSAV
GLTGTPSPELVTDPSAGAKQPDTSSAGQAGAAGSGATPSSTSTRPTVPPAPASTPEPGPP
TTRSVPTLPPAPPPTLPPAPPPTVPPPPTTVPPTTPPPQPGPAAPSVTVRLVAAGDPSRI
SVRVRTQTTGVLTMRISNVSGSGALTVRNSSWSCAQASPASVRCTGGRGQALLEQSVTGG
VEPIVVRITDAAGNTWTETLRPT
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggcagacgcgaccttgtggtcgagcgaggcatgggcctcggcccctgacgcatac
ctcctcctgcgcacgcgggagggttccgccgaggcgttcggcgagctgtggcgtcgtcac
ctgcctgctgcgtatgccgtcgccgggcgtcaccggggccgctcggctcccgaggacatc
gtcgccgaggccgcagcccgggtgctggcgctcatccgcgacggccggggacctgacgag
cacttccgcgcctacttcctctcggccgtgcgcaccgtcgccatcgaccagggccgtcgc
gacctgcgggtcgtgcccgccgagcccgaggacctcgaggagctggccgagccgcacgag
gacccgctcgcggtgctcgccgccgacgacgaggggctagccctcgtccgtgaggccttc
gccgggctctcggagcgcgaccagcgcgtgttgtggcacaccaccgtcgagggcgcggca
ccgcgcacggtcgcgccggcgatgggcatgacggccaacgccgtcagtgcccgcgcgatg
cgagcacgcgagtcgctccgggccctctacctcgacgcctgcgcgcagcgtgggctcgcg
gacgcggacagcgaggagtgccgctggacggtggagcacctcggggccctcgtgcgcggg
cgactgcccaagcggcagaccgagcgggccgaggcgcacgtcgccggctgcccgcacgcg
gcggccatcgccgacgacctgcggctggtccacgacgggttcccggcgctgctcgtgccg
ctcgtgctcgcggcaggtctcggcacgccgggcttcgtcggtgtcgctgccctgctgggt
ctctccggtggggcgggggcggccggcgtcgccggctcggcctccgcgaccggcagcgga
cctgtcgccggtggagctgtcggcactccgggtccagtcaccggctcggccggctcgagc
gcgccgtcgggtgcgtcgggtgcgggctcggtcgccgaggtcgcgagccaggtgacggcc
ctggtcgcggggctcgccgtcacggccggggtggcgggggcgctcgcccttccggccccg
tcgctcgcacgtccgtccgcggcgccggtcccggcggcgacgaccaccgtgcccgcaccg
tcggtgacgtcgggccccggcggcgtcaccgcgggtctcccgggcacggcaccgggctcg
accggtcagccgagcggcgccctcgagaccgtgagcgcctccgcgatcccgtcggccgtc
ggcctgaccggcacgccgtcgccggagctggtgaccgacccctccgccggggcgaagcag
ccggacacctcgtccgccggccaggccggagcggccgggagcggcgcgactccatcgtcc
acctcgacccgtccgacggtgcctccggccccggcgagcacgcccgagccgggaccgccg
acgacgcgatccgtcccgaccctgccgcccgcaccgccgccgaccctgccgcccgcaccg
ccgccgaccgtgccgccgccgccgacgaccgtgccgccgacgaccccgccgccgcagccc
ggtcccgctgcacccagcgtcacggtgcggctcgtggccgccggcgacccgtcgcgcatc
tcggtgcgcgtgcgcacgcagacgacaggtgtcctgacgatgcgcatcagcaacgtgtcc
ggctccggggccctgaccgtccgcaactcgagctggtcgtgcgcgcaggcgtcgccggcc
tcggtgcgctgcaccgggggtcgcggtcaggcgctgctcgagcagtcggtcacgggcggt
gtcgagccgatcgtcgtgcgcatcaccgacgccgccggcaacacctggaccgagaccctc
cgccccacctga
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