Terrabacter sp. C0L_2: U5C87_10375
Help
Entry
U5C87_10375 CDS
T09725
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ted
Terrabacter sp. C0L_2
Pathway
ted03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U5C87_10375 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ted03019
]
U5C87_10375 (groL)
03110 Chaperones and folding catalysts [BR:
ted03110
]
U5C87_10375 (groL)
03029 Mitochondrial biogenesis [BR:
ted03029
]
U5C87_10375 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ted04147
]
U5C87_10375 (groL)
Enzymes [BR:
ted01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
U5C87_10375 (groL)
Messenger RNA biogenesis [BR:
ted03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
U5C87_10375 (groL)
Chaperones and folding catalysts [BR:
ted03110
]
Heat shock proteins
HSP60 / Chaperonin
U5C87_10375 (groL)
Mitochondrial biogenesis [BR:
ted03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
U5C87_10375 (groL)
Exosome [BR:
ted04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
U5C87_10375 (groL)
Exosomal proteins of other body fluids (saliva and urine)
U5C87_10375 (groL)
Exosomal proteins of breast cancer cells
U5C87_10375 (groL)
Exosomal proteins of colorectal cancer cells
U5C87_10375 (groL)
Exosomal proteins of bladder cancer cells
U5C87_10375 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7243
Cadherin_5
AIM3_BBC1_C
Motif
Other DBs
NCBI-ProteinID:
WVM98753
LinkDB
All DBs
Position
2243103..2244716
Genome browser
AA seq
537 aa
AA seq
DB search
MAKQLEFDDSARKSLERGVDALANAVKVTLGPKGRNVVIDKKWGAPTITNDGVTIAREIE
LEDAYENLGAQLAKEVATKTNDVAGDGTTTATVLAQAMVKEGLRNVAAGAAPAALKRGMD
KAVTAVNDQLLANAREVDGKDEIASVATLSAQDATLGGLIGEAFDKVGKDGVITVEESST
TATELEFTEGMQFDKGYLSAYFVTDTERMETVLEDAYILINQGKISSVAEVLPVLEKVVQ
SGKPLLIIAEDVDGEALSTLVVNKIRGTFNVAAVKAPGFGDRRKAMLQDIAILTGGQVIA
PEVGLSLDQADLTVLGQARRVVLTKDNTTIIDGNGEEGEVSGRVHQIKAEIERTDSDWDR
EKLQERLAKLAGGVCVIKVGAHTEVELKEKKHRIEDAISATRAAIEEGIVAGGGTALIHA
ASAIDTLELSGDEATGAAIVRKAVAEPLRWIAENAGLQGYVVTSKVAELPLGQGLNAATG
EYGDLIAAGVIDPVKVTRSALRNAESIASMILTTDTLVVDKPEDEPEAGGHGHGHGH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagctggagttcgacgactccgcccgcaagtcgctcgagcgcggcgttgac
gcgctcgccaacgccgtcaaggtgacgctcggcccgaagggccgcaacgtcgtcatcgac
aagaagtggggcgcccccacgatcacgaacgacggcgtgaccatcgcccgcgagatcgag
ctcgaggacgcctacgagaacctcggcgcccagctcgccaaggaggtcgcgaccaagacc
aacgacgtcgccggtgacggcacgacgaccgcgaccgtgctcgcccaggccatggtcaag
gaaggcctgcgcaacgtcgccgccggcgccgccccggccgcgctcaagcgcggcatggac
aaggccgtcaccgcggtcaacgaccagctcctcgccaacgcccgcgaggtcgacggcaag
gacgagatcgcctccgtcgccaccctctccgcccaggacgccaccctgggtggcctcatc
ggcgaggcgttcgacaaggtcggcaaggacggcgtcatcaccgtcgaggagtcctcgacg
acggcgaccgagctcgagttcaccgagggcatgcagttcgacaagggctacctctcggcc
tacttcgtcaccgacaccgagcgcatggagaccgtcctcgaggacgcctacatcctcatc
aaccagggcaagatctcctcggtcgccgaggtgctcccggtcctcgagaaggtcgtgcag
tccggcaagccgctgctcatcatcgccgaggacgtcgacggcgaggccctctcgacgctc
gtcgtcaacaagatccgcggcacgttcaacgtcgcggccgtcaaggcccccggcttcggc
gaccgccgcaaggccatgctccaggacatcgccatcctcaccggtggccaggtcatcgcg
cccgaggtcgggctcagcctcgaccaggccgacctgaccgtcctcggccaggcccgccgc
gtcgtcctcaccaaggacaacacgacgatcatcgacggcaacggcgaggagggcgaggtc
tccggccgcgtccaccagatcaaggccgagatcgagcgcaccgactccgactgggaccgc
gagaagctccaggagcgcctcgccaagctcgccggtggcgtctgcgtcatcaaggtcggc
gcgcacaccgaggtcgagctcaaggagaagaagcaccgcatcgaggacgcgatctccgcg
acgcgcgccgcgatcgaggagggcatcgtcgccggtggcggcaccgccctcatccacgcc
gcctccgcgatcgacaccctcgagctcagcggtgacgaggccacgggcgctgccatcgtg
cgcaaggccgtcgccgagccgctgcgctggatcgccgagaacgccggtctgcagggctac
gtcgtcacctccaaggtggccgagctgcccctcggccagggcctcaacgcggccacgggc
gagtacggcgacctcatcgccgccggcgtcatcgacccggtcaaggtcacccgttccgcg
ctgcgcaacgccgagtccatcgcgtcgatgatcctcacgaccgacacgctcgtcgtcgac
aagcccgaggacgagccggaggccggcggccacggtcacggccacggccactga
DBGET
integrated database retrieval system
