Terrabacter sp. C0L_2: U5C87_12925
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Entry
U5C87_12925 CDS
T09725
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ted
Terrabacter sp. C0L_2
Pathway
ted00470
D-Amino acid metabolism
ted00550
Peptidoglycan biosynthesis
ted01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U5C87_12925 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U5C87_12925 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ted01011
]
U5C87_12925 (murD)
Enzymes [BR:
ted01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
U5C87_12925 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ted01011
]
Precursor biosynthesis
Amino acid ligase
U5C87_12925 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
FAD_binding_3
CoA_transf_3
NAD_binding_7
Pyr_redox
TrkA_N
AlaDh_PNT_C
3HCDH_N
Pyr_redox_3
ApbA
GIDA
Motif
Other DBs
NCBI-ProteinID:
WVM94909
LinkDB
All DBs
Position
2827659..2829149
Genome browser
AA seq
496 aa
AA seq
DB search
MSYDPLYEPREGLTHRDADWSGINVLVVGLGVSGFAAADALADRGAHVVAVSRDETEAIR
ERATILEILDVDVRLGPEHMVSPPPGTELVVTSPGVPPHDPLMLAAATAGIPVWGEVELA
WRMRAKEGAAPWLTVTGTNGKTTTVNMLASILRHAGLRATSAGNVGTPLLEAVLHPEPYD
VLAVELSSFQLHWQRSVSAVASAVLNVAPDHIDWHGSYAEYLRAKGKIYENTHLACIYNV
ADIQTEQLVMEANVVEGCRAVGFTTGIPAPSMVGVVEDVLADRAFVEQRQRSAAELCTIA
DLQGDAPSIAPHYIANALAAAALARAYGVGPIAVRDGLRAFRPDRHRIAEIATVKGVRFV
NDSKATNPHAAAAAIRSFDSVVWIAGGLLKGADVDSLVEEMASRLRGVVLIGADRDQIAQ
ALSRHAPDVPVVDLSETDTGVMDRVVREAARLAQPGDVVLLAPAAASMDMFTNYGARGDA
FEEAVRRHLEAHGGLE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgagctacgacccgctctacgagccccgtgagggactgacccaccgcgacgccgactgg
tcggggatcaacgtcctcgtcgtcggcctcggcgtgtccggcttcgcggccgccgacgcc
ctcgccgaccgcggcgcgcacgtcgtcgcggtctcgcgcgacgagaccgaggcgatccgg
gagcgcgcgacgatcctcgagatcctcgacgtcgacgtccggctcggccccgagcacatg
gtgtcgccgccccccgggaccgagctcgtcgtcacctccccgggtgtcccgccgcacgac
cccctcatgctcgctgcggccacggccggcatcccggtgtggggcgaggtcgagctcgcc
tggcgcatgcgcgccaaggagggcgccgcgccgtggctcaccgtcacgggcaccaacggc
aagacgacgaccgtcaacatgctcgcctcgatcctgcgccacgcggggctgcgcgccacc
tccgccggcaacgtcggcaccccgctgctcgaggcggtgctccacccggagccctacgac
gtgctcgcggtcgagctctcgagcttccagctgcactggcagcgctcggtctcggccgtc
gcgtcggcggtcctcaacgtcgcgccggaccacatcgactggcacggcagctacgcggag
tacctccgggccaagggcaagatctacgagaacacccatctcgcctgcatctacaacgtc
gcggacatccagaccgagcagctcgtcatggaggccaacgtcgtcgagggctgccgcgcc
gtcgggttcacgaccggcatcccggccccgtcgatggtcggggtcgtcgaggacgtcctc
gccgaccgggccttcgtcgagcagcgtcagcgctctgccgccgagctctgcacgatcgcc
gacctccagggcgacgccccgtccatcgcgccgcactacatcgccaacgccctcgccgcc
gcggccctggctcgcgcctacggcgtcgggcccatcgcggtgcgcgacggtctgcgcgcc
ttccgtcccgaccggcaccggatcgccgagatcgcgacggtcaagggcgtccggttcgtc
aacgactccaaggccaccaatccccacgcggcagcggcggcgatccggtccttcgactcg
gtcgtgtggatcgccggcggcctgctcaagggcgccgacgtcgacagcctcgtcgaggag
atggcctcgcggctgcgcggtgtcgtcctcatcggcgcggaccgtgaccagatcgcccag
gccctttcccgacacgcgccggatgtcccggtcgtcgacctgtccgagaccgacactgga
gtcatggaccgagtcgtcagggaggccgcgcgcctcgcccagccgggcgacgtcgtgctg
ctcgcgcctgctgcggcgtcgatggacatgttcaccaactacggggcccgcggcgacgcc
ttcgaggaggcggtccggcgccacctcgaggcacacgggggtctggagtga
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