Terrabacter sp. C0L_2: U5C87_13785
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Entry
U5C87_13785 CDS
T09725
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ted
Terrabacter sp. C0L_2
Pathway
ted03030
DNA replication
ted03410
Base excision repair
ted03420
Nucleotide excision repair
ted03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U5C87_13785 (polA)
03410 Base excision repair
U5C87_13785 (polA)
03420 Nucleotide excision repair
U5C87_13785 (polA)
03440 Homologous recombination
U5C87_13785 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ted03032
]
U5C87_13785 (polA)
03400 DNA repair and recombination proteins [BR:
ted03400
]
U5C87_13785 (polA)
Enzymes [BR:
ted01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U5C87_13785 (polA)
DNA replication proteins [BR:
ted03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
U5C87_13785 (polA)
DNA repair and recombination proteins [BR:
ted03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
U5C87_13785 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U5C87_13785 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
DNA_pol_A_exo1
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
WVM95071
LinkDB
All DBs
Position
3017131..3019806
Genome browser
AA seq
891 aa
AA seq
DB search
MSRLLLLDGHSLAYRAFFALPAENFSTSTGQHTNAVYGFTSMLINMLRDEEPTHVVVAFD
KARQSFRTEEYSEYKAGRARTPDEFQGQIPLVKEILDALRIRFVELDGYEADDIIATFAT
QAEAKGIDVLICSGDRDTFQLVSDKVTILYPVRGVSEVWRMGPTQVEDKYGVPPTRYSDL
AAMVGESSDNLPGVPGVGPKTAAKWITQYGDLDGIVASIDKIPGKAGQSLRDHLDQVLRN
RRLNQLVKDSPVGVEIEDLQRTQWSREEVHTVFDGLEFRVLRDRLFATVEAAAPEAEEGF
DIDGAVLAPEAVAAWVAEHLATDHRSGLSVTGTWARGTGDASGVAVAAADGSAAWIDLQT
LTPEGEAALGAWVEDAARPKAIHDAKGPIEALAARGWSLAGLTSDTQLAAYLVKPDQRTY
HLDDLVLRNLHRELSGSAPTDGQGMLDFGGDADEQAAQKEMIRASAVRDLAAVLDEQVVS
TGGEQLLAEVELPLVDVLARMERTGIAVDVDGLDGLEKDFAAKVAQAQQDAWDAIGGETI
NLGSPKQLQEVLFGTLAMPKTKKTKTGWTTDADALNDLFTKTGHPFLEALLRHRDAARLR
VTVEGLQKSVADDGRIHTTYLQTIAATGRLSSTEPNLQNVPIRTEEGRRIRELFVVGDGF
DALMSADYSQIEMRVMAHLSGDEGLIEAFRTGEDLHKYVGSKVFGVEPDDVTAAMRSKVK
AMSYGLAYGLSAFGLSKQLTISTEEARGLMEGYFERFGGVSDYLKEVVAEARGTGYTATM
FGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIMKVAMIGVDRALTDAGAASRILL
QVHDELVLEVAAGERDDVEKLVRHEMGHAAELDVPLDINVGVGHSWHDAAH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgacttctcctcctcgacggacactcgctggcctatcgcgccttcttcgcgctc
cccgccgagaacttctcgacgagcaccgggcagcacaccaacgccgtctacggcttcacc
tcgatgctcatcaacatgctgcgcgacgaggagccgacgcacgtcgtcgtggccttcgac
aaggcccgccagtcgttccgcaccgaggagtactccgagtacaaggcgggccgcgcccgc
acgcccgacgagttccagggacagatcccgctcgtcaaggagatcctcgacgcgctgcgc
atcaggttcgtcgagctcgacggctacgaggccgacgacatcatcgcgacgttcgcgacg
caggccgaggccaagggcatcgacgtcctcatctgctccggcgaccgagacaccttccag
ctcgtgtccgacaaggtgaccatcctctacccggtccgcggcgtctccgaggtgtggcgg
atgggcccgacccaggtcgaggacaagtacggcgtccctccgacccgctacagcgacctc
gcggcgatggtcggcgagagctcggacaacctgccgggcgtgcccggcgtcggccccaag
accgccgcgaagtggatcacccagtacggcgacctcgacggcatcgtcgccagcatcgac
aagatccccggcaaggcgggccagtcgctgcgcgaccacctcgaccaggtgctgcgcaac
cgtcgcctcaaccagctcgtcaaggacagccccgtcggcgtcgagatcgaggacctccag
cgcacccagtggagccgcgaggaggtccacacggtcttcgacggcctcgagttccgcgtc
ctgcgcgaccggctcttcgcgaccgtcgaggccgccgcgccggaggccgaggagggcttc
gacatcgacggtgcggtgctggcgcccgaggccgtggcggcctgggtggcggagcacctc
gccaccgaccaccggtcgggcctgtccgtcaccggcacgtgggcgcgaggcactggtgac
gccagcggcgtggccgtggcagccgccgacggcagcgcggcgtggatcgacctgcagacc
ctgacgcccgagggcgaggccgccctgggcgcttgggtcgaggacgccgcacgccccaag
gccatccacgacgccaaggggccgatcgaggcccttgccgcgcgaggctggtcgctcgcc
gggctgacgagcgacacccagctcgcggcatacctcgtcaagcccgaccagcgcacctac
cacctcgacgacctcgtgctgcgcaacctgcaccgtgagctcagcgggtcggcgccgacc
gacggccagggcatgctcgacttcggcggcgacgccgacgagcaggccgcccagaaggag
atgatccgcgcgagcgccgtgcgcgacctcgccgcggtgctcgacgagcaggtggtctcc
accgggggcgagcagctcctcgccgaggtcgagctgccgctcgtcgacgtgctggcgcgg
atggagcgcaccgggatcgccgtcgacgtcgacggtctcgacggcctcgagaaggacttc
gccgccaaggtcgcacaggcccagcaggacgcctgggacgccatcggcggcgagacgatc
aacctcggctcgcccaagcagctgcaggaggtcctcttcggcacgctcgcgatgcccaag
acgaagaagaccaagaccggctggaccaccgacgcagacgcgctcaacgacctcttcacc
aagaccgggcacccgttcctcgaggcgctcctgcgccaccgggacgccgcacgcctgcgc
gtcaccgtcgaggggctgcagaagtcggtggccgacgacggccgcatccacaccacctac
ctgcagacgatcgccgcgacggggcggctcagctccaccgagcccaaccttcagaacgtc
ccgatccgcaccgaggaggggcgccgcatccgtgagctcttcgtcgtgggcgacggcttc
gacgcgctgatgtccgccgactactcccagatcgagatgcgggtcatggcccacctgtcc
ggcgacgaggggctcatcgaggccttccgcaccggcgaggacctccacaagtacgtcggc
tccaaggtgttcggcgtcgagcccgacgacgtcacggccgccatgcgctcgaaggtcaag
gccatgtcctacggcctcgcctacggcctgtccgcgttcggcctgtccaagcagctgacg
atcagcacggaggaggcccggggcctcatggagggctacttcgagcgcttcggcggcgtc
agcgactacctcaaggaggtcgtcgccgaggcgcgcggcaccggctacaccgcgacgatg
ttcgggcgacgccgctacctgcccgacctgacctcggacaaccgccagcgccgcgagatg
gccgagcgcatggcgctcaacgcccccatccagggctcggccgccgacatcatgaaggtc
gcgatgatcggtgtcgaccgggcgctgaccgacgcaggcgccgcgtcgcgcatcctgctc
caggtccacgacgagctcgtcctcgaggtggcggccggcgagcgcgacgacgtcgagaag
ctcgtgcgccacgagatgggccacgccgccgagctcgacgtcccgctcgacatcaacgtc
ggggtcggacactcctggcacgacgccgcgcactga
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