KEGG   Terrabacter sp. C0L_2: U5C87_13785
Entry
U5C87_13785       CDS       T09725                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ted  Terrabacter sp. C0L_2
Pathway
ted03030  DNA replication
ted03410  Base excision repair
ted03420  Nucleotide excision repair
ted03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ted00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    U5C87_13785 (polA)
   03410 Base excision repair
    U5C87_13785 (polA)
   03420 Nucleotide excision repair
    U5C87_13785 (polA)
   03440 Homologous recombination
    U5C87_13785 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ted03032]
    U5C87_13785 (polA)
   03400 DNA repair and recombination proteins [BR:ted03400]
    U5C87_13785 (polA)
Enzymes [BR:ted01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     U5C87_13785 (polA)
DNA replication proteins [BR:ted03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     U5C87_13785 (polA)
DNA repair and recombination proteins [BR:ted03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     U5C87_13785 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     U5C87_13785 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_lambd_f DNA_pol_A_exo1 HHH_5 HHH
Other DBs
NCBI-ProteinID: WVM95071
LinkDB
Position
3017131..3019806
AA seq 891 aa
MSRLLLLDGHSLAYRAFFALPAENFSTSTGQHTNAVYGFTSMLINMLRDEEPTHVVVAFD
KARQSFRTEEYSEYKAGRARTPDEFQGQIPLVKEILDALRIRFVELDGYEADDIIATFAT
QAEAKGIDVLICSGDRDTFQLVSDKVTILYPVRGVSEVWRMGPTQVEDKYGVPPTRYSDL
AAMVGESSDNLPGVPGVGPKTAAKWITQYGDLDGIVASIDKIPGKAGQSLRDHLDQVLRN
RRLNQLVKDSPVGVEIEDLQRTQWSREEVHTVFDGLEFRVLRDRLFATVEAAAPEAEEGF
DIDGAVLAPEAVAAWVAEHLATDHRSGLSVTGTWARGTGDASGVAVAAADGSAAWIDLQT
LTPEGEAALGAWVEDAARPKAIHDAKGPIEALAARGWSLAGLTSDTQLAAYLVKPDQRTY
HLDDLVLRNLHRELSGSAPTDGQGMLDFGGDADEQAAQKEMIRASAVRDLAAVLDEQVVS
TGGEQLLAEVELPLVDVLARMERTGIAVDVDGLDGLEKDFAAKVAQAQQDAWDAIGGETI
NLGSPKQLQEVLFGTLAMPKTKKTKTGWTTDADALNDLFTKTGHPFLEALLRHRDAARLR
VTVEGLQKSVADDGRIHTTYLQTIAATGRLSSTEPNLQNVPIRTEEGRRIRELFVVGDGF
DALMSADYSQIEMRVMAHLSGDEGLIEAFRTGEDLHKYVGSKVFGVEPDDVTAAMRSKVK
AMSYGLAYGLSAFGLSKQLTISTEEARGLMEGYFERFGGVSDYLKEVVAEARGTGYTATM
FGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIMKVAMIGVDRALTDAGAASRILL
QVHDELVLEVAAGERDDVEKLVRHEMGHAAELDVPLDINVGVGHSWHDAAH
NT seq 2676 nt   +upstreamnt  +downstreamnt
gtgagccgacttctcctcctcgacggacactcgctggcctatcgcgccttcttcgcgctc
cccgccgagaacttctcgacgagcaccgggcagcacaccaacgccgtctacggcttcacc
tcgatgctcatcaacatgctgcgcgacgaggagccgacgcacgtcgtcgtggccttcgac
aaggcccgccagtcgttccgcaccgaggagtactccgagtacaaggcgggccgcgcccgc
acgcccgacgagttccagggacagatcccgctcgtcaaggagatcctcgacgcgctgcgc
atcaggttcgtcgagctcgacggctacgaggccgacgacatcatcgcgacgttcgcgacg
caggccgaggccaagggcatcgacgtcctcatctgctccggcgaccgagacaccttccag
ctcgtgtccgacaaggtgaccatcctctacccggtccgcggcgtctccgaggtgtggcgg
atgggcccgacccaggtcgaggacaagtacggcgtccctccgacccgctacagcgacctc
gcggcgatggtcggcgagagctcggacaacctgccgggcgtgcccggcgtcggccccaag
accgccgcgaagtggatcacccagtacggcgacctcgacggcatcgtcgccagcatcgac
aagatccccggcaaggcgggccagtcgctgcgcgaccacctcgaccaggtgctgcgcaac
cgtcgcctcaaccagctcgtcaaggacagccccgtcggcgtcgagatcgaggacctccag
cgcacccagtggagccgcgaggaggtccacacggtcttcgacggcctcgagttccgcgtc
ctgcgcgaccggctcttcgcgaccgtcgaggccgccgcgccggaggccgaggagggcttc
gacatcgacggtgcggtgctggcgcccgaggccgtggcggcctgggtggcggagcacctc
gccaccgaccaccggtcgggcctgtccgtcaccggcacgtgggcgcgaggcactggtgac
gccagcggcgtggccgtggcagccgccgacggcagcgcggcgtggatcgacctgcagacc
ctgacgcccgagggcgaggccgccctgggcgcttgggtcgaggacgccgcacgccccaag
gccatccacgacgccaaggggccgatcgaggcccttgccgcgcgaggctggtcgctcgcc
gggctgacgagcgacacccagctcgcggcatacctcgtcaagcccgaccagcgcacctac
cacctcgacgacctcgtgctgcgcaacctgcaccgtgagctcagcgggtcggcgccgacc
gacggccagggcatgctcgacttcggcggcgacgccgacgagcaggccgcccagaaggag
atgatccgcgcgagcgccgtgcgcgacctcgccgcggtgctcgacgagcaggtggtctcc
accgggggcgagcagctcctcgccgaggtcgagctgccgctcgtcgacgtgctggcgcgg
atggagcgcaccgggatcgccgtcgacgtcgacggtctcgacggcctcgagaaggacttc
gccgccaaggtcgcacaggcccagcaggacgcctgggacgccatcggcggcgagacgatc
aacctcggctcgcccaagcagctgcaggaggtcctcttcggcacgctcgcgatgcccaag
acgaagaagaccaagaccggctggaccaccgacgcagacgcgctcaacgacctcttcacc
aagaccgggcacccgttcctcgaggcgctcctgcgccaccgggacgccgcacgcctgcgc
gtcaccgtcgaggggctgcagaagtcggtggccgacgacggccgcatccacaccacctac
ctgcagacgatcgccgcgacggggcggctcagctccaccgagcccaaccttcagaacgtc
ccgatccgcaccgaggaggggcgccgcatccgtgagctcttcgtcgtgggcgacggcttc
gacgcgctgatgtccgccgactactcccagatcgagatgcgggtcatggcccacctgtcc
ggcgacgaggggctcatcgaggccttccgcaccggcgaggacctccacaagtacgtcggc
tccaaggtgttcggcgtcgagcccgacgacgtcacggccgccatgcgctcgaaggtcaag
gccatgtcctacggcctcgcctacggcctgtccgcgttcggcctgtccaagcagctgacg
atcagcacggaggaggcccggggcctcatggagggctacttcgagcgcttcggcggcgtc
agcgactacctcaaggaggtcgtcgccgaggcgcgcggcaccggctacaccgcgacgatg
ttcgggcgacgccgctacctgcccgacctgacctcggacaaccgccagcgccgcgagatg
gccgagcgcatggcgctcaacgcccccatccagggctcggccgccgacatcatgaaggtc
gcgatgatcggtgtcgaccgggcgctgaccgacgcaggcgccgcgtcgcgcatcctgctc
caggtccacgacgagctcgtcctcgaggtggcggccggcgagcgcgacgacgtcgagaag
ctcgtgcgccacgagatgggccacgccgccgagctcgacgtcccgctcgacatcaacgtc
ggggtcggacactcctggcacgacgccgcgcactga

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