Terrabacter sp. C0L_2: U5C87_15105
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Entry
U5C87_15105 CDS
T09725
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ted
Terrabacter sp. C0L_2
Pathway
ted00750
Vitamin B6 metabolism
ted01100
Metabolic pathways
ted01240
Biosynthesis of cofactors
Module
ted_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
U5C87_15105 (pdxS)
Enzymes [BR:
ted01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
U5C87_15105 (pdxS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NMO
NanE
His_biosynth
IGPS
Glu_synthase
FMN_dh
DHO_dh
TMP-TENI
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
WVM95322
LinkDB
All DBs
Position
complement(3308074..3309009)
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AA seq
311 aa
AA seq
DB search
MSTTPTTGSTPAADQQAAGSTGTTRVKRGMAEMLKGGVIMDVVTAEQAKIAEDAGAVAVM
ALERVPADIRAQGGVSRMSDPDMIDSIIEAVSIPVMAKARIGHFVEAQVLQSLGVDYIDE
SEVLTPADYANHIDKWQFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTH
MRTLRAEINRLRSMSPDELYVAAKELQAPYELVKEVAEAGKLPVVLFTAGGIATPADAAM
MMQLGAEGVFVGSGIFKSGNPAQRAEAIVKATTFHDDPDVIAKVSRGLGEAMVGINVDEI
PQPHRLAERGW
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccaccccgaccacgggcagcacgcccgcggctgaccagcaggcagcgggctcc
accggcacgacgcgcgtcaagcgcggcatggccgagatgctcaagggcggcgtcatcatg
gacgtcgtcacggccgagcaggccaagatcgccgaggacgccggcgccgtcgccgtcatg
gcactcgagcgggtccccgccgacatccgcgcccagggcggcgtgtcgcggatgagcgac
cccgacatgatcgacagcatcatcgaggccgtctcgatccccgtcatggccaaggcccgc
atcggccacttcgtcgaggcccaggtgctgcagagcctcggcgtcgactacatcgacgag
tccgaggtgctgaccccggccgactacgccaaccacatcgacaagtggcagttcacggtg
cccttcgtctgcggcgcgaccaacctcggcgaagccctgcgccgcatcaccgagggcgcg
gcgatgatccgctccaagggcgaggccggcacgggtgacgtctccaacgcgacgacgcac
atgcgcacgctgcgcgccgagatcaaccgcctgcgctcgatgagccccgacgagctctac
gtcgcggccaaggagctccaggccccctacgagctcgtcaaggaggtcgccgaggccggc
aagctgcccgtcgtgctcttcacggccggtggcatcgccacccccgccgacgccgccatg
atgatgcagctcggcgccgagggcgtcttcgtcggctccggcatcttcaagtcgggcaac
ccggcccagcgcgccgaggccatcgtcaaggcgacgaccttccacgacgaccccgacgtc
atcgccaaggtctcccgcggcctcggcgaggcgatggtcggcatcaacgtcgacgagatc
ccgcagccgcaccggctcgccgagcgcggttggtga
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