Terrabacter sp. C0L_2: U5C87_16585
Help
Entry
U5C87_16585 CDS
T09725
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ted
Terrabacter sp. C0L_2
Pathway
ted03030
DNA replication
ted03430
Mismatch repair
ted03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U5C87_16585
03430 Mismatch repair
U5C87_16585
03440 Homologous recombination
U5C87_16585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ted03032
]
U5C87_16585
03400 DNA repair and recombination proteins [BR:
ted03400
]
U5C87_16585
Enzymes [BR:
ted01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U5C87_16585
DNA replication proteins [BR:
ted03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U5C87_16585
DNA repair and recombination proteins [BR:
ted03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U5C87_16585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
UVR
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WVM95603
LinkDB
All DBs
Position
3604127..3605920
Genome browser
AA seq
597 aa
AA seq
DB search
MQAIQSTFDDLGTPLAGVTFVVVDLETTGGTPAQCGITEIGAVKVRGGEVLGEFQTLVNP
AEPIPAFISVLTGITDSMVRDAPRIDSALPAFLEFAAGSVLVAHNAGFDIGFLKAAAART
GARWPGFPVLDTLQLARQLVVRDESPNHRLSSLAQVFGSPTTPDHRALHDARATVDVLHG
LIERVGNLGVHTLEELASYSSRVTPSQRRKRFLADPLPSAPGVYLFKDGSDRVLYVGTSR
DIRTRVRSYFTASEQRSRMAEMVRLAQAVHPVVCQTSLEAQVRELRLIDEHKPRFNRRSK
NGRKVMWVKLTQERFPRLSIVRQVKDDGAHYIGPFRSRITAQSAIDAVHEVVPLRQCTGR
LNGRGTACALADMGRCGAPCTGAQSEGDYAVVVAECRAIFTGNARPSAELLRARLEELAS
QERFEDAARVRDRFLQLVRGAARAQRLAPLVRSPEIVAARRSGLGGWELVSIRHGRLAGT
VVSPRGADPMTYVRSMQATAEVVPAPTPERPSALTEETEILLRWLEAPGVRIVELDGSWT
CPVGGAGSVRSELEPVVASAHDAVGFDNDVPGPRSGPGGRSDHGGATGRAAGLRRAG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccatccagtccacgttcgacgacctcggcacccccctcgccggtgtcacgttc
gtcgtcgtggacctcgagaccaccggcggcaccccggcccagtgcggcatcaccgagatc
ggcgccgtcaaggtgcgcggcggagaggtgctcggcgagttccagacgctcgtcaaccct
gccgagcccatccccgcgttcatctccgtcctgaccggcatcaccgactcgatggtccgc
gacgccccgcgcatcgacagtgcgctccccgccttcctcgagttcgcggccggcagcgtc
ctcgtcgcgcacaacgccggcttcgacatcggcttcctcaaggccgcggccgcgcggacg
ggagcccgctggcccggcttcccggtgctcgacaccctccagctggcgcgccagctcgtc
gtccgggacgagtcgcccaaccaccggctctcctcgctggcccaggtcttcggctctccg
acgacgcccgaccaccgcgccctccacgacgcgcgcgccacggtcgacgtgctccacggc
ctcatcgagcgcgtcggcaacctcggtgtgcacaccctcgaggagctcgccagctacagc
tcccgggtcacgccgtcgcagcgccgcaagcgcttcctcgccgacccgctcccgagcgcc
ccgggggtctacctcttcaaggacggcagcgaccgcgtcctctacgtcggcacgagccgc
gacatccgcacccgtgtccgcagctacttcaccgcctcggagcagcgcagccggatggcc
gagatggtccgtctggcccaggcggtccaccccgtcgtgtgccagacctcgctcgaggcg
caggtgcgcgagctgcgcctcatcgacgagcacaagccccgcttcaaccgccgatcgaag
aacggccgcaaggtcatgtgggtcaagctgacgcaggagcgcttcccccgtctgtcgatc
gtccggcaggtcaaggacgacggggcccactacatcggccccttccggtcccgcatcacg
gcgcagtcggccatcgacgcggtccacgaggtcgtgccgctgcgccagtgcaccggtcgc
ctcaacggacgcggcacggcctgcgccctcgccgacatgggccgctgcggcgcgccgtgc
accggcgcgcagtccgagggcgactacgccgtggtcgtcgcggagtgccgtgccatcttc
accggcaacgcccgtcccagcgccgagctcctccgggccaggctcgaggagctggcctcg
caggagcgcttcgaggacgccgcccgcgtccgtgaccgcttcctgcagctggtgcgcggc
gcggcgcgtgcccagcggctcgcgccgctcgtccgctcacccgagatcgtcgccgcccgc
cgcagcggcctcggtggctgggagctcgtctcgatccggcacggccgcctggccggcacc
gtcgtcagcccgcgaggggcagaccccatgacctacgtccggtccatgcaggccacggcc
gaggtcgtgcccgctcccacccccgagcgcccctccgcgctgaccgaggagacggagatc
ctgctccggtggctcgaggcgccgggcgtgcgcatcgtcgagctcgacgggtcctggacc
tgtcccgtcggcggggccggctcggttcgcagcgagctcgaaccagtcgtcgcgtccgcc
cacgacgccgtcggcttcgacaacgacgtgcccggcccacggtcaggtcccggcggtcga
tccgaccacggcggcgcaaccggtcgcgcggccggcctgcgccgggccgggtag
DBGET
integrated database retrieval system
