Terrabacter sp. C0L_2: U5C87_18275
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Entry
U5C87_18275 CDS
T09725
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ted
Terrabacter sp. C0L_2
Pathway
ted00300
Lysine biosynthesis
ted00470
D-Amino acid metabolism
ted01100
Metabolic pathways
ted01110
Biosynthesis of secondary metabolites
ted01120
Microbial metabolism in diverse environments
ted01230
Biosynthesis of amino acids
Module
ted_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U5C87_18275 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U5C87_18275 (dapF)
Enzymes [BR:
ted01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
U5C87_18275 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WVM95929
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All DBs
Position
complement(3922074..3922925)
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AA seq
283 aa
AA seq
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MTRFTKGHGTENDFVLVPDLEGTLELTPAQVQRIADRHAGLGADGVIRVVRTALATDESV
RAQSHEAQWFMDYRNADGSLAEMCGNGTRVFAEYLRREGLAFGSSFAIATRAGVKTVRVV
DEGYAVDLGPWRLGDEEGDRRDGFDVMVKPRHGKPVPALTLDIGNPHAVVMLPEGITLEN
LDLGEAPQLHPEPAGGSNVEFVRAVGPGHIAMRVHERGVGETRSCGTGAAAAALATRFWS
GVEDLSPWTVDVPGGRLTVTPLPGQRVELAGPAVLVADGDFPL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcttcaccaagggccacggcaccgagaacgacttcgtgctcgtccccgacctc
gagggaacgctcgagctgacccccgcccaggtgcagcgcatcgccgaccggcacgccggt
ctcggcgccgacggcgtcatccgggtcgtgcgcaccgcgctcgcgaccgacgagtcggtg
cgcgcccagtcgcacgaggcgcagtggttcatggactaccgcaacgccgacggctccctc
gccgagatgtgcggcaacggcacgcgcgtcttcgccgagtacctccgccgcgagggactc
gccttcggctcgtcgttcgccatcgcgacccgtgccggtgtcaagaccgtccgggtcgtc
gacgaggggtatgccgtcgacctcggtccgtggcgcctcggcgacgaggagggtgaccga
cgtgacggcttcgacgtcatggtcaagccgcgccacggcaagccggtgccggcgctgacg
ctcgacatcggcaacccgcacgccgtcgtcatgctccccgagggcatcaccctggagaac
ctcgacctcggcgaggcgccccagctgcaccccgagcccgccggcggctccaacgtcgag
ttcgtccgcgcggtcggcccggggcacatcgccatgcgcgtccacgagcgcggcgtcggc
gagacgcggtcgtgcggcaccggagccgccgccgcagccctggcgacgcgcttctggtcc
ggggtcgaggacctcagcccgtggaccgtcgacgtgccgggcggacgcctgaccgtcacg
cccctgcccggtcagcgcgtcgagctcgccggaccggctgtcctcgtcgccgacggggac
ttcccactctga
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