Terrabacter sp. C0L_2: U5C87_19205
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Entry
U5C87_19205 CDS
T09725
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ted
Terrabacter sp. C0L_2
Pathway
ted03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U5C87_19205 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ted03400
]
U5C87_19205 (mutM)
Enzymes [BR:
ted01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
U5C87_19205 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
U5C87_19205 (mutM)
DNA repair and recombination proteins [BR:
ted03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U5C87_19205 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
TackOD1
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
WVM96109
LinkDB
All DBs
Position
complement(4129518..4130378)
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AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLEDHVVGRHVTRARITGVRVARRHDAGPEDLAARLHDVTVTAASRRG
KYLWLALDGEDALIVHLGMSGQMLVEPADAPLEKHCHARFDFSDDGPQLRFVDQRTFGGL
ALSPLRPDGIPESVAHIAPDPFEPAYDQAAVVRRMKQRDSAVKRALLDQTLVSGIGNIYA
DEALWRAQVHGERLCSSLTKPTLARILDHAHDVMAEALGQGGTSFDALYVNVNGASGYFD
RSLHAYGRAGTPCDRCGTIMRREQFMNRSSFSCPVCQPRPRRRSPS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagctgcccgaggtcgaggtcgtccgtcgtggcctcgaggaccacgtcgtgggt
cgtcacgtcacccgtgcccggatcaccggggtgcgggtggcccgacgccacgacgccggc
cccgaggacctcgccgcgcgcctgcacgacgtcacggtcaccgcggcgtcgcgccgcggc
aagtacctctggctcgcgctcgacggcgaggacgccctcatcgtgcacctcgggatgagc
ggacagatgctcgtcgagccggccgacgcgccgctcgagaagcactgtcacgcccgcttc
gacttcagcgacgacggaccgcagctgcgcttcgtcgaccagcgcaccttcgggggactc
gcgctgtcaccgcttcggcccgacggcatccccgagtcggtcgcccacatcgcgccggac
cccttcgagccggcctacgaccaggccgcggtggtgcgccggatgaagcagcgcgacagc
gccgtcaagcgcgccctgctcgaccagaccctggtctcggggatcggcaacatctacgcc
gacgaggccctctggcgcgcgcaggtgcacggcgagcggctgtgctcctcgctgaccaag
ccgaccctcgcccgcatcctcgaccacgcccacgacgtcatggccgaggcgctcggccag
ggcggcacgagcttcgacgcgctctacgtcaacgtcaacggtgcgagcggctacttcgac
cgctcgctccacgcctacggccgcgcgggcaccccgtgcgaccggtgcggcacgatcatg
cgccgcgagcagttcatgaaccgctcgtcgttctcgtgccccgtctgccagccgcgcccg
agacgacgcagcccgtcctga
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