Terrabacter sp. C0L_2: U5C87_20035
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Entry
U5C87_20035 CDS
T09725
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ted
Terrabacter sp. C0L_2
Pathway
ted00300
Lysine biosynthesis
ted00470
D-Amino acid metabolism
ted01100
Metabolic pathways
ted01110
Biosynthesis of secondary metabolites
ted01120
Microbial metabolism in diverse environments
ted01230
Biosynthesis of amino acids
Module
ted_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U5C87_20035 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U5C87_20035 (lysA)
Enzymes [BR:
ted01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
U5C87_20035 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WVM96266
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Position
complement(4305483..4306901)
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AA seq
472 aa
AA seq
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MRAHEAGALHAEGYRGPAWLQTPADVNALVPSLWATSVGRGSDGVLTVGGVSVTELAREF
GTPAYIIDEDDFRSRARDFKQTYAEVFDSVSGGADVFYAGKAFLCTEVARWVHDEGLHLD
VCTGGELAVAKRAGVPGERIGLHGNNKSVAEIRDALDYGVSRIVIDSFDEIERVAAVATE
LGVVAPVLVRVTVGVEAHTHEFIATAHEDQKFGLSLAGGHAFEAARRILGKPESLRLLGL
HSHIGSQIFDTAGFEVSARRIVGLHSQIARELGAELPELDLGGGFGIAYTTEHDPLPPKS
LAAGMAEIIERECRADGIAVPRISIEPGRAIAGPSTFTLYEVGTVKPVDLDGGAQRVYVS
VDGGMSDNVRTALYDANYSCTLASRASDAAPVLGRVVGRHCESGDIVVKDEFLPGDIGAG
DLLAVPGTGAYCRSLSSQYNHTPRPPVVAVRDGVARVIVRRETIDDLLALDV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcacacgaagctggagcgctgcacgcggagggctatcgcggccccgcgtggctc
cagaccccggccgacgtcaacgccctcgtcccgtccctctgggcgacgtccgtgggccgg
gggagcgacggcgtcctcacggtcggtggggtgagcgtgaccgagctggcacgcgagttc
ggcacaccggcatacatcatcgacgaggacgacttccgttcgcgcgcaagggatttcaag
cagacgtacgccgaggtgttcgacagcgtgtcgggcggcgcggacgtcttctacgccggc
aaggccttcctctgcaccgaagtggcccggtgggtgcacgacgagggactgcacctcgac
gtgtgcaccggcggtgagctcgcggtggcgaagcgggccggcgtgcccggcgagcgcatc
ggtctgcacggcaacaacaagagcgtcgccgagatccgtgacgcgctcgactacggcgtg
agccggatcgtcatcgactccttcgacgagatcgagcgcgtcgctgcggtggcgaccgag
ctcggcgtcgtcgcaccggtcctcgtccgcgtcaccgtcggcgtcgaggcccacacccac
gagttcatcgccacggcccacgaggaccagaagttcggcctctccctggccggcgggcat
gccttcgaagcagcacggcggatcctcggcaagcccgagtcgctgcgcctgctcggcctg
cacagccacatcggctcgcagatcttcgacacggcaggcttcgaggtgtcggcccggcgc
atcgtcggcctccactcgcagatcgcacgcgagctcggcgccgagctgcccgagctcgac
ctcggcggcgggttcggcatcgcctacacgaccgagcacgacccgctgccgccgaagagc
ctcgcggccggcatggccgagatcatcgagcgcgagtgccgcgccgacgggatcgccgtg
ccccgcatctccatcgagccgggccgcgccatcgccgggccctcgaccttcaccctctac
gaggtcggcaccgtcaagcccgtcgacctcgacggcggcgcccagcgcgtctacgtctcg
gtcgacggcggcatgagcgacaacgtgcgcaccgccctctacgacgccaactactcgtgc
accctggccagccgcgcctcggacgccgcgccggtcctcgggcgcgtcgtggggcggcac
tgcgagagcggcgacatcgtcgtcaaggacgagttcctccccggcgacatcggtgccggt
gacctgctcgccgtccccggcacgggcgcctactgccggtcgctgtcgagccagtacaac
cacacaccacggccgccggtcgtcgcggtgcgcgacggggtcgcccgcgtcatcgtgcgg
cgcgagaccatcgacgacctgctcgccctcgacgtctga
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