Terrabacter sp. C0L_2: U5C87_20520
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Entry
U5C87_20520 CDS
T09725
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ted
Terrabacter sp. C0L_2
Pathway
ted03420
Nucleotide excision repair
ted03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U5C87_20520
03430 Mismatch repair
U5C87_20520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ted03400
]
U5C87_20520
Enzymes [BR:
ted01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U5C87_20520
DNA repair and recombination proteins [BR:
ted03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U5C87_20520
MMR (mismatch excision repair)
Other MMR factors
U5C87_20520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WVM99013
LinkDB
All DBs
Position
complement(4409795..4411909)
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AA seq
704 aa
AA seq
DB search
MLDGLDPEQREVAMAPPGPLCILAGAGTGKTRAITHRIAYAVHSGAQQPQRVLALTFTAR
AAGEMRSRLRGLGVQGVQARTFHAAALRQLHFFWPQAIGGAAPEVMSYKAPAVAEAASRL
RMQFDRTTVRDLAAEIEWAKVNLLTPQSYAARAREQRREPPGLDLTAMARLFEAYEDVKQ
RRGVIDFEDVLLLTVGILDEREDIARTVRGQYRQFVVDEYQDVNDLQQRLLDQWLGERKD
LCVVGDPAQTIYSFTGASPRHLVGFPQRFPGAQVVRLVRNYRSTPQIVGLANTIVASGTQ
AARDGAVRLLAQSEPGPAPELTSYPDDPAEAAAVAERIRALVAGGHQAAEIAILFRTNAQ
SEAFESALTDAGVPYLVRGGDRFFARKEVRDAVLVLRGAARSDDGEKPLGEITRDVITGA
GWSHEPPTGGGATRERWESLTALATLADDMAAAAPEARLPELVAELERRAAEQHAPAVQG
VTLASLHAAKGLEWDTVFLVGASDGLMPISMAEGPDAIEEERRLLYVGLTRARKQLFLSW
SGARTPGARATRRVSRFLAPAADILGQGARSEARSGGSKRSAPKVARLAHCRGCGAELVS
AAQRKTGRCDDCPPTYDEATFERLRTWRLAVAREASVPAFVVFTDATLTAIAESSPSDEG
ALSVISGVGARKLEQYGSDILAILGGADPEELIESRSAAKESAE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atcctcgacgggctcgaccccgagcagcgcgaggtcgcgatggccccgccggggccgctg
tgcatcctcgcgggcgccggcaccggcaagacgcgtgccatcacccaccgcatcgcgtat
gccgtccactcgggtgcgcagcagccgcagcgcgtgctggcgctgaccttcacggcccgc
gcggccggggagatgcgctcgcgcctgcgcgggctcggcgtgcagggcgtgcaggcccgc
accttccacgcagcggccctgcgccagctgcacttcttctggccgcaggcgatcgggggc
gccgctcccgaggtgatgagctacaaggcgccggccgtcgcggaggccgcgagccggctg
cgcatgcagttcgaccgcacgacggtgcgtgacctcgccgccgagatcgagtgggccaag
gtcaacctgctgacgccgcagtcgtatgccgcccgcgcccgtgagcagcgtcgtgagccc
ccgggtctcgacctcaccgcgatggcacggctcttcgaggcctacgaggacgtcaagcag
cgtcgcggggtcatcgacttcgaggacgtcctcctcctcacggtcggcatcctcgacgag
cgcgaggacatcgctcgcaccgtgcgcgggcagtaccgccagttcgtcgtcgacgagtac
caggacgtcaacgacctccagcagcggctgctcgaccagtggctgggggagcgcaaggac
ctctgcgtcgtcggcgaccccgcccagacgatctactccttcaccggcgccagcccccgg
cacctcgtcggcttcccgcagcgcttccccggcgcgcaggtcgtgcgactcgtgcgcaac
taccgctcgacgccgcagatcgtcggcctcgccaacaccatcgtcgcctccggcacccag
gccgcgcgcgacggcgccgtgcgcctgctggcgcagtccgagcccggccccgctcccgag
ctgacgagctaccccgacgacccggccgaggctgcggccgtcgccgagcgcatccgcgcc
ctcgtggccggcggccaccaggccgccgagatcgccatcctcttccgcaccaacgcccag
tccgaggccttcgagtcggccctcaccgacgccggtgtgccctacctcgtgcgcggcggc
gaccggttcttcgcgcgcaaggaggtccgtgacgccgtcctggtcctgcgcggagcagcg
cgcagcgatgacggtgagaagcccttgggtgagatcacccgcgacgtcatcaccggtgcc
ggctggtcgcacgagccgccgacgggtgggggtgcgacgagggagcggtgggagtcgctg
accgccctcgccaccctcgccgacgacatggcggccgccgcccccgaggcgcggttgccc
gagctcgtcgccgagctcgagcggcgcgccgccgagcagcacgctcccgccgtgcaggga
gtgaccctggccagcctgcacgcggccaagggcctcgagtgggacaccgtcttcctcgtc
ggggcctccgacggcctcatgccgatctcgatggcggagggtcccgatgccatcgaggag
gagcggcggctgctctacgtcgggctgacccgcgcccgcaagcagctgttcctgtcgtgg
tccggcgcccgcaccccgggggcgcgtgccacccggagggtctcgcgcttcctggcgccc
gcggccgacatcctcgggcaaggcgctcgcagcgaggcccgctccggcgggtccaagcgc
tccgctcccaaggtggcccgtctcgcccactgccgcggctgcggcgccgagctggtctcc
gcggcccagcgcaagaccggccgctgcgacgactgtcctcccacctacgacgaggcgacc
ttcgagcggctgcgcacgtggcggctggccgtcgcgcgcgaggcgagcgtcccggccttc
gtcgtcttcaccgacgcgacgctgaccgcgatcgccgagagctcgccctccgacgagggc
gctctgtcggtcatcagcggggtgggggcccgcaagctcgagcagtacggcagcgacatc
ctggcgatcctcggcggcgcagacccggaagaactcatcgaaagccgttctgccgcaaag
gaatccgccgaatag
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