Terrabacter sp. C0L_2: U5C87_21760
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Entry
U5C87_21760 CDS
T09725
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ted
Terrabacter sp. C0L_2
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ted03021
]
U5C87_21760
Transcription machinery [BR:
ted03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U5C87_21760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
HTH_23
Phage_antitermQ
MarR_2
HTH_Crp_2
HTH_38
HTH_Tnp_4
DUF7343
Metal_resist
HalX
KORA
Motif
Other DBs
NCBI-ProteinID:
WVM96593
LinkDB
All DBs
Position
4670376..4671239
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AA seq
287 aa
AA seq
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MAQHTSHTRPSFAERDAETSELFARLAATDDPDESEQLVEQIVILYLDLCTTMAGRYDGR
GVEHDDLVQVARLALVKAIRRYEPGHAPSFAAYAVPTISGELKRWFRDRGWVVRPPRRLQ
ELRADLQAVRAELEQELGGTPTDADLAEAVGATVEEVREVASAATGFRPLSLDCSTADDE
RPGLSTFLAEVDEELQAADDRVCLTEALTELDDDERELLLMRYVEGMTQREIGEARGVSQ
MQVSRTLRRITVRLHDHLTEKPVEPVQPVEPVEPFEPLEPEAMTAAS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcacacctctcacacccgaccctcgttcgccgagcgcgacgccgagacgtcc
gagctcttcgcgagactggcggccaccgacgaccccgacgagtccgagcagctcgtggag
cagatcgtgatcctctacctcgacctgtgcacgacgatggccggacgctacgacggtcgc
ggcgtcgagcacgacgacctcgtccaggtcgcgcggctcgccctggtcaaggccatccgg
cgctacgagcccgggcacgccccgtcgttcgccgcctacgcggtccccaccatctccggt
gagctcaagcgctggttccgcgaccgcggctgggtcgtgcgcccgccgcgccgcctgcag
gagctgcgcgcggacctccaggccgtccgtgccgagctcgagcaggagctgggcggcacg
cccaccgacgccgacctcgccgaagccgtgggggcgacggtcgaggaggtgcgcgaggtc
gcgtcagccgcgaccggcttccggcccctgtcgctcgactgcagcaccgcggacgacgaa
cgtcccggcctctcgacgttcctcgccgaggtcgacgaggagctgcaggcggccgacgac
cgcgtctgcctgaccgaggcgctcaccgagctcgacgacgacgagcgcgagctgctgctc
atgcgctacgtcgaggggatgacccagcgcgagatcggtgaggcacgcggtgtcagccag
atgcaggtgtcgcgcaccttgaggcgcatcaccgtgcggctgcacgaccacctcacggag
aagcccgtcgagcccgtacagcccgtagagcccgtggagccgttcgagcccctcgagccg
gaggcgatgaccgccgcctcctga
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