Candidatus Tenderia electrophaga: Tel_01485
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Entry
Tel_01485 CDS
T04171
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
tee
Candidatus Tenderia electrophaga
Pathway
tee03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Tel_01485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tee03400
]
Tel_01485
Enzymes [BR:
tee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Tel_01485
DNA repair and recombination proteins [BR:
tee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Tel_01485
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tel_01485
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Tel_01485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ALP51913
UniProt:
A0A0S2T9T1
LinkDB
All DBs
Position
complement(319936..321363)
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AA seq
475 aa
AA seq
DB search
MNNSATPTFYWYDYEAFGLNPMSDRLAQFAGIRTDMDLNIIGEPVMMYCKPANDFLPNPS
SCLITGITPQKALAEGLPEAEFIQRINQEFSQANTCVLGYNNLRFDDEFTRHTLYRNLFD
PYAREWQNGCSRWDLLDLVRATRSLRPEGIEWPVNDEGRPSVRLEDLTVANGISHESAHD
ALSDVYATIAVAKLIKQQQPKLFDFAFNNRSKNKLFKLLNLREQKPVIHVSGMYPVEKGN
MAVVVPVAQHPINKNGIIVYDLSADPQDLLNLSPAKIHERLFTRNEDLAEGVARIPLKTV
HVNKCPVIAPFMTLDGKAAKKYGIDLNVCRTHLEIIRGQPGLAKKIQKVMSETEFEKRTD
PDEMLYGGPFFNDDDKERMRHIHSMAPQDLVGYQPPFNDSRLPEMLFRMRARNWPETLTE
AEQQRWQTFRQTRLDVGAYLAELTRLSQMAERTDTELKVLKALEDYARGLEASLA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaataattcagccacaccgaccttttattggtacgactacgaggccttcggccttaac
cccatgagcgatcgcctggctcagttcgccggcatccgtaccgacatggacctgaatatc
atcggcgagcccgtgatgatgtattgcaaaccggcgaacgattttctacccaatccgagc
tcatgcctgatcaccggcatcacgccgcaaaaggccctggccgagggcctcccggaggcg
gaatttattcaacgcattaatcaggagttcagccaagccaacacctgcgtactgggttat
aacaacctgcgcttcgatgacgagttcacccgccataccttgtatcgcaatctattcgac
ccatacgcccgcgaatggcaaaacggctgttcgcgctgggatctgctggacctggtgcgc
gccacccgcagcttacgcccggaaggcatcgaatggccggtcaatgacgaggggcgcccc
agtgtgcggttggaggatctaaccgtggccaacggcatcagtcacgaatccgcccatgac
gccctctccgatgtctacgccaccattgccgtggccaaattgatcaaacagcaacaaccc
aagctgttcgatttcgcctttaacaaccgcagcaagaacaaacttttcaagctgctcaat
ctgcgcgaacaaaagccggtgattcacgtctccggcatgtacccggtggaaaagggcaat
atggcggtggtggtgccggtggcccagcacccgatcaacaagaacggcattatcgtctac
gacctcagcgccgatccgcaagacctgctcaatctcagtccggccaagattcacgaacgc
ctattcacccgcaatgaagatctagctgaaggcgtggcgcgcatcccgctcaagaccgtg
cacgtcaacaagtgccccgtaattgcgccgttcatgaccctggacggcaaggcggccaag
aaatacggcattgacctcaatgtctgccgcacccacctggaaatcattcgcggccagccg
ggcctggcgaaaaagatccagaaggtcatgagcgaaaccgaattcgaaaaacgcaccgac
cccgatgagatgctctacggtggccccttcttcaatgatgatgacaaggagcgcatgcgc
cacatccacagcatggcgccgcaagacctggtcggctaccaaccgcctttcaacgacagc
cgcctgcccgaaatgctgtttcgcatgcgcgcccgcaactggcccgaaacgcttaccgaa
gcggagcaacaacgctggcagaccttcagacagacacgtctcgatgtgggcgcctacctc
gccgagctgacccgcctgagtcaaatggcggagcgcaccgacacagaattgaaggtgctc
aaagcactggaagactacgcccgcgggttagaggccagcctggcctga
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