Candidatus Tenderia electrophaga: Tel_01970
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Entry
Tel_01970 CDS
T04171
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
tee
Candidatus Tenderia electrophaga
Brite
KEGG Orthology (KO) [BR:
tee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tee03019
]
Tel_01970
Enzymes [BR:
tee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Tel_01970
Messenger RNA biogenesis [BR:
tee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Tel_01970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
NACHT
AAA_19
nSTAND3
T2SSE
SLFN-g3_helicase
AAA_30
FtsK_SpoIIIE
Cas3-like_C_2
PhoH
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ALP54699
UniProt:
A0A0S2THS5
LinkDB
All DBs
Position
421022..424834
Genome browser
AA seq
1270 aa
AA seq
DB search
MLVDRRRLRRRLQRLQRDDQAGLTRLAADIEASVHKRQCRRDKLPVPTYPDALPVSQRRD
EIIAALRDHQVIIVAGETGSGKTTQLPKICLDAGRGIDGLIGHTQPRRLAARSVATRIAT
ELESELGYAVGYKVRFSDRTRPESYIKLMTDGILLAESQADRFLNQYDTLIIDEAHERSL
NIDFLLGYLKQLLPKRPTLKIIITSATIDTERFAQHFDDAPIIQVSGRTYPVEMRYRPLQ
AEDEDTQDRDLQQAIRDAVDELAAEGRDDVLIFLPGEREIRETAESLRKHHPPHTEILPL
YARLSAAEQNRVFQPHKGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSHRTKVQRL
PIEKISQASANQRAGRCGRVGPGICIRLYAEDDFNLRPEFTEPEIKRSNLAAVILQMKAL
KLGDIEQFPFVEAPEQRMIGDGYKLLEELGALTRNKQLTPTGRHLAKLPVDPRLARMVLA
GRDENCLSEVLVIASALSVQEPRERPHEKQQAADEKHAQFKDKDSDFIAYLNLWRAYHEQ
AHHLSNNKLRKWCKENYISYLRMREWHDVYVQLKCLATEQGGKLNQQAADYAQIHRALLA
GLLGNIANKNDKQEYVGARGIKLNIFPGSALFKKQPKWIVAAELVETTRMYARSVAKIEA
EWLEQVAGELCKRSWFDPHWEKKAAAVMAYERLTLYGLIVNPKRKVHYHKINPAEARELF
IRGALVEGDFNTCAPFFQHNRELVEEVEALEAKSRRRDVLVDDQALFEFYDKRIPEDVCD
GRRFEKWRKQAERKEPQRLFLNKQDLMLHGAGDVTAAQFPDTLEVAGMSLPLSYHFEPGH
AQDGVTVSVPLPALNLLTPQRFEWLVPGLLHDKLCQLIKSLPKSLRRNFVPVPNFADACL
HVLAPSDDALLEALQQQLFKMTGVKVTRVDWDLDKLTPHMLMNFKVVDDQGEVVAMGRDL
VQLQQQLKGEAQQSFAAVPVWEGEREGITTWGFGELPQQIEFERNGVQLRGYPALVDNKE
NVAIKLRDTEQQAERETGQALRRLVMFALPDKIKYLRKHLPNLKQMCLYYAPTGKCEQLQ
NDLVDAVIDQTFFGADLPRDEQAFKQALEHGRQALMNVANELCTLVNDILAEHHRLNKTL
KGNLSPAWLHAVPDIQEQLAHLIYPRFIQHTPAEWLREYPRYLKAVNLRLEKLGSGAAAR
DRAATQELKPLWQAYLERREIHRQQGIVDPTLTQYRWMIEELRVSLFAQTLGTKMPVSVK
RLKQQFAQVI
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
ctgttggtcgatcgccggcggttgcggcgtcggctgcaacgcctgcagcgggacgatcag
gccgggcttacgcgcttggcggcggacatcgaggcctcggtgcacaaacggcaatgccgc
cgcgacaagctgcctgtaccgacctatccggacgcgctgccggtcagtcagcggcgtgac
gagatcatcgccgcgctgcgcgaccatcaggtgattatcgtcgccggcgaaaccggctcg
ggcaagaccacccaattgcccaagatctgcctcgacgccgggcgcggtatcgacggcctg
atcggccacacccagccgcgtcgcctggccgcacgcagcgtggcgacacgcatcgccacg
gaattggagagcgaactgggctacgcggtgggttataaagtgcgtttctccgaccgcact
cgcccggagagctacatcaaactcatgaccgacggcatcctgctggccgagagtcaggcc
gaccgttttctcaatcaatacgatacgctcatcatcgacgaggcgcacgagcgcagcctc
aacatcgactttctgctcggttatctgaaacagctgctgcccaagcggccgacgctgaaa
atcatcatcacctcggccaccatcgataccgagcgctttgcccagcactttgacgatgcc
cccatcatccaggtctccggccgcacctatccggtggagatgcgctatcgcccgctgcag
gccgaagacgaagatacacaggatcgcgacctgcaacaggccattcgcgatgcggtggat
gaactggccgctgaagggcgggacgatgtgctgatctttctgccgggcgagcgcgagatt
cgcgaaaccgccgagagcctgcgcaaacatcatccgccccatactgaaattttgccgctt
tatgcgcgcttgtccgccgccgaacagaatcgcgtgtttcaaccccacaaaggcagacgc
attgtgctcgccaccaatgtggccgaaacctcgctcaccgtgcccggtattcgttatgtc
atcgacccgggcctggtgcgtatcagtcgttacagtcatcgcaccaaggtgcagcgcctg
cctattgaaaagatctcccaggcctcggccaatcagcgtgccgggcgttgcggccgcgtc
ggccccggcatctgcatccggctctatgcggaagatgatttcaacttacggcctgagttt
actgagccggagatcaaacgcagcaatctggccgccgtcatcctgcagatgaaagcgctc
aagctgggcgatatcgaacaattcccctttgtcgaggcgcccgagcaacgcatgatcggc
gacggctacaaacttctggaagagctcggagcattaacccgcaacaaacagctgacccca
accggtcgccatctggccaagctgccggtggatccgcgcctggcgcgcatggtgctggcg
gggcgggatgaaaactgcctcagtgaagtgttggtcatcgccagcgccttgagcgtgcag
gagccgcgcgaacggccccacgaaaaacaacaggccgccgacgaaaaacacgcccagttc
aaagacaaggactccgacttcatcgcctatctcaatctgtggcgcgcctatcacgaacag
gcgcaccacctcagcaataacaaattgcgcaaatggtgcaaggaaaattacatctcctac
ctgcgcatgcgcgaatggcatgacgtgtatgtccagctgaaatgcctggccaccgaacag
ggcggcaaactcaatcaacaggccgccgattacgcacagatccatcgcgccttgctggcc
ggattattgggtaatatcgccaacaaaaacgacaaacaggagtatgtgggcgcgcgcggc
atcaagctcaatatctttcccggctcggcgctgttcaagaaacagcccaagtggatcgtg
gcggcggagctggtggagacgacgcgcatgtacgcccgcagcgtggccaagatcgaagcc
gagtggctggaacaggtggccggggagttgtgcaagcgcagttggtttgatccccactgg
gaaaaaaaggccgcggcggtgatggcctacgaacggctgacgctgtacggcttgatcgtt
aaccctaaacgcaaggttcactaccataagatcaatccggccgaggcgcgcgagttgttc
atccgcggcgcgttggtggagggtgacttcaacacctgcgcgccgttctttcaacacaac
cgtgaattggtggaagaggtcgaggcgctggaggccaagtcgcgccgtcgcgatgtgttg
gtggacgaccaggcgctgttcgagttttacgacaaacgcattcccgaagatgtctgcgac
ggccgccgctttgaaaagtggcgcaagcaggccgagcggaaagagccgcaacggctgttt
ctgaataaacaggatttgatgctgcacggcgccggtgatgtgaccgcggcgcaatttccc
gacaccctggaggtggccggcatgtcattgccattgagttatcacttcgagcccggtcac
gcacaagacggtgtcaccgttagcgtgccgctgccggccttgaatctgttaacaccgcaa
cgcttcgagtggctggtgcccggtctgctgcatgacaagctgtgtcagttaatcaagtct
ttgcccaagtccctgcggcgcaacttcgtgccggtacccaactttgccgacgcctgcctg
catgtgttggcgccgtcggacgacgctttgctggaggcgttacagcaacagttgttcaaa
atgaccggcgtcaaagtcaccagggtcgattgggatctggacaagttgaccccgcacatg
ctgatgaacttcaaggtggtggacgatcagggtgaggtggtcgccatggggcgcgatctg
gtgcagctgcaacaacagctcaaaggcgaggcgcaacagagtttcgccgccgtgccggtg
tgggagggcgagcgtgaaggcatcactacgtggggtttcggcgagctgccgcagcagatc
gagttcgagcgtaacggcgtgcagctgcgcggttatcctgcacttgtcgacaataaggag
aatgtcgccatcaagctgcgcgacaccgaacagcaggccgaacgcgaaaccggtcaggcg
ttgcgccgtctggtaatgttcgccttgccggacaagatcaagtatctgcgaaagcacctg
cccaatctgaagcagatgtgtctctactacgcgcccacgggcaagtgtgaacagctgcaa
aacgacctggtggacgccgtgatcgatcagaccttttttggcgcggatctgccccgcgac
gaacaggcgtttaagcaagcgctggaacacggccggcaggcgctgatgaatgtcgccaac
gagctgtgtaccttggtgaacgacatcctggccgaacaccaccgcttgaacaaaaccctc
aagggcaatctgtcaccggcctggctgcacgccgtgccggatatacaagagcagctggcc
catcttatctatccccgctttattcaacacactccggccgaatggctgcgtgaatacccg
cgctatctcaaggcggtcaatctgcgcctggagaaactgggcagcggcgctgcggcgcgc
gaccgggccgccacccaggagctgaagccgctgtggcaggcctatcttgaacggcgcgaa
atccatcggcagcagggtattgtcgatccgacgttgacgcagtaccgctggatgatcgaa
gagctgcgcgtctccctgttcgcccaaaccctgggcaccaaaatgccggtgtcggtgaaa
cgcctcaagcaacagttcgcacaagttatttag
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