Candidatus Tenderia electrophaga: Tel_06560
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Entry
Tel_06560 CDS
T04171
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tee
Candidatus Tenderia electrophaga
Pathway
tee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tel_06560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tee03019
]
Tel_06560
03400 DNA repair and recombination proteins [BR:
tee03400
]
Tel_06560
Enzymes [BR:
tee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tel_06560
Messenger RNA biogenesis [BR:
tee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Tel_06560
DNA repair and recombination proteins [BR:
tee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Tel_06560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
DUF7985
HTH_7
Motif
Other DBs
NCBI-ProteinID:
ALP52844
UniProt:
A0A0S2TCF1
LinkDB
All DBs
Position
complement(1414240..1416375)
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AA seq
711 aa
AA seq
DB search
MPAMTATTPDISPALHILQSVFGYDEFRGEQAAIVAQVCNGGDALVLMPTGGGKSLCYQI
PAIVRDGVAVVVSPLIALMQDQVAALRQYGVKAAYLNSSLNPAEAADIEEQLQRGALDLL
YVAPERLFNGRMLALLGRLKLALFAIDEAHCVSQWGHDFRPEYIQLSMLHERFPEVPRIA
LTATADAPTRREIVERLSLHEARIFNSGFDRPNIRYRISENPGNAREQLLRFIRNEHEGE
AGIVYCLSRKKVDETARWLADKGLTALPYHAGMSQQQRQQHQERFLREDGVIIVATIAFG
MGIDKPDVRFVAHLNLPKSIEAYYQETGRAGRDGLPADAWMAYGLQDVITLRQMQEGSDA
DEQHKRVERHKLDAMLGLCELTSCRRQALLHYFDDVMDQPCGNCDNCLTPPETWDATVAA
QKALSCVHRTGQRFGVNYLIDVLRGSESERIKQFGHDTLSTYGIGKEYSVNEWRGVYRQL
IARGLLSVDLEGYGGLQLTEAARPVLRGETQLMLRKLRKSAKAERKRSAQFGKAADQRLW
DALRNRRRELAEEQGVPAYVIFHDATLAEMVERQPQTLEQLGRISGIGDRKLDAYGDAFL
DVILEHSQPAAVTDTVDETLKLLSQGMTPPAIAQQRDLTLTSVYNHLAKAIESGEIELQD
AVALDDETFKAIRFAFEQHEDGKLKPVFEALEGEVDYGVLRCVQAALSVVR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccatgactgcgaccactccggacatctctcccgccctgcacatcctgcaatcc
gtcttcggttacgatgagttccgcggcgagcaggccgccatcgtcgcgcaggtctgcaac
ggcggtgatgccctggtgctcatgcccaccggcggcggcaagtcgctctgttaccagatc
cccgccatcgtccgcgacggcgtcgccgtggtggtctcgccgctcatcgccctgatgcag
gaccaggtggcggcgctgcgccaatacggcgtcaaggcggcctatctcaactccagtctg
aatccggccgaggccgccgacattgaggaacagctgcagcgcggcgcgctggacctgctc
tacgtggcgccggaacgcctgttcaacggccgcatgctggcgctgctcggccggctcaag
ctggccctgttcgccatcgacgaggcccactgcgtgtcgcaatgggggcatgacttccgc
cccgagtacattcagctctccatgctgcacgagcgcttccccgaggtgccgcgtatcgcc
ctcaccgccaccgccgacgcccccacccggcgcgaaatcgtggaacggctgtcactgcac
gaagcgaggattttcaacagcggcttcgaccgccccaacatccgctaccgcatcagcgag
aacccgggcaacgcgcgcgagcagctgctgcgcttcatccgcaacgaacacgaaggcgag
gccggcatcgtctactgcctgtcgcgcaaaaaggtggacgagaccgcgcgctggctcgcc
gacaaggggctcaccgccctgccctaccacgccggcatgtcgcagcaacaacgccagcag
caccaggaacgcttcctgcgcgaggacggcgtgatcatcgtcgccaccatcgccttcggc
atgggcatcgacaagccggacgtgcgcttcgtcgcccatctcaacctgcccaaaagcatc
gaggcctattatcaagagaccggccgtgccgggcgcgacggcctgcccgccgacgcttgg
atggcctatggcctgcaggacgtgatcaccctgcgccagatgcaggagggctcggacgcc
gacgaacagcacaagcgcgtcgaacgccacaagctcgacgccatgctcggcctgtgcgaa
ctgaccagttgccggcgccaggcactgctgcactatttcgacgatgtcatggaccaaccc
tgcggcaactgcgacaactgcctcaccccgcccgagacctgggacgccacggtggcggcg
cagaaggcgctctcctgcgtgcaccgcaccggccagcgcttcggggtgaactatctcatc
gacgtgctgcgcggcagcgagagtgaacgcatcaaacagttcggccatgacacgctcagc
acctatggcatcggcaaggagtacagcgtcaatgaatggcgcggcgtctatcgccagctc
atcgcccgcggcctgctgagtgtggacctggaaggctacggcggtctgcagctcaccgaa
gcggcgcgcccggtactgcgcggcgagacccaactgatgctgcgcaagctacgcaaatcg
gccaaggccgaacgcaaacgcagcgcccagttcggcaaggcggccgaccaacgtctgtgg
gacgccctgcgcaaccgccgccgcgaactggccgaggaacaaggcgtgcccgcctacgtc
atcttccacgacgccaccctggccgagatggtcgagcgccagccccagaccctggaacaa
ctggggcgcatctccggcatcggcgatcgtaaactggatgcctacggcgacgccttcctc
gatgtgatcctcgaacacagccagcccgccgccgtcaccgacacggtggacgaaacgctg
aaattactcagccagggcatgacgccgccggccatcgcccaacagcgcgacctgacgctg
accagcgtctacaaccacctggccaaggctatcgaaagcggcgagatcgagctgcaagat
gcggtggcgctggatgatgaaactttcaaagcgatccgcttcgccttcgaacaacacgaa
gacggcaaactgaaaccggtgtttgaggcattggagggtgaggtggattacggggtgttg
cgctgtgtgcaggcggcgttaagcgttgtcagataa
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