Candidatus Tenderia electrophaga: Tel_07660
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Entry
Tel_07660 CDS
T04171
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tee
Candidatus Tenderia electrophaga
Pathway
tee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tel_07660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tee03019
]
Tel_07660
03016 Transfer RNA biogenesis [BR:
tee03016
]
Tel_07660
Enzymes [BR:
tee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Tel_07660
Messenger RNA biogenesis [BR:
tee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Tel_07660
Transfer RNA biogenesis [BR:
tee03016
]
Prokaryotic type
tRNA degradation factors
Tel_07660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH_SLS1_2
KH_KhpA-B
KH-I_KHDC4-BBP
NuiA_2
SPATA25
S1_2
DUF7909
Motif
Other DBs
NCBI-ProteinID:
ALP53041
UniProt:
A0A0S2TD03
LinkDB
All DBs
Position
1660220..1662307
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AA seq
695 aa
AA seq
DB search
MTPIKKVFQYGDHSVTLETGEIARQASGAVMCSMGDTAVLVTCVAQKEAIEGRDFFPLTV
NYQERTYSAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKAFTNEVQIIATVVSLD
SEIDPDIPAMIGASAALMLSGVPFQGPIGAARVAYKDGQYVLNPSISQLEDSQLDLVVAG
TENAVLMVESEAKELSEQVMLDAVMFGHQQLQAVINAIREFSAEADVRSWDWQAPGKDEA
LAAAVSQAAETQIVEAYQIKEKQSRYARLSEIRTQVVEQLCAGEAPQWSAADVGDAVGSL
EKRIVRERILDGEPRIDGRDKDTVRPISIRVGVLPRVHGSALFTRGETQALVATTLGTGK
DAQLIDAIEGERKEPFMLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGVQAVMPNMDD
YPYVIRVVSEITESNGSSSMASVCGSSLAMMDAGIPLKSPVAGIAMGLIKDEQRFAVLSD
ILGDEDHLGDMDFKVAGTTEGVTALQMDIKIDGITREIMEAALAQAQDGRIHILGEMAKA
ISAPREELSEYAPRIITFKINPDRIRDVIGKGGATIRALTEETGTTIDLDDSGTVKVASV
DKAAGEEAKRRIEELVADVEVGKVYDGKVAKLMDFGAFVTILPGKDGLVHISQISNERVE
NVADKLSEGDTVKVKVLEVDKQGRIRLSMKAVAEG
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacacccattaaaaaggtctttcaatacggtgaccatagcgttaccttggaaaccggt
gaaattgcccgccaggcctccggcgccgtaatgtgcagcatgggcgataccgcggtcctg
gtgacctgtgtcgcgcagaaggaagcgatcgaaggtcgcgacttctttccgctgacggtc
aactatcaggagcgcacctactcggccggcaagattccgggtggttttttcaaacgcgaa
ggacgccccaccgagaaagagaccctgacctcgcgcctcatcgaccgtcctatccgtccc
ctgtttcccaaggcctttaccaacgaagttcagatcatcgccactgtggtctcgctggac
agcgagatcgatcccgatattcccgccatgatcggtgcctcggcggcactgatgctctcc
ggtgtaccgtttcaggggccaatcggcgccgcccgcgttgcctacaaggacggccagtat
gtgctgaatcccagtatctcccagctggaagactcgcagcttgatctggtcgtggccggc
accgaaaacgcggtgctgatggttgaatctgaggccaaagaattatccgagcaggtcatg
ctggatgcggtcatgttcggtcaccagcaactgcaggcggtgatcaacgccatccgcgaa
ttcagcgccgaggccgatgtaaggtcttgggattggcaagcgccgggcaaggacgaagcc
ctggccgccgccgtcagtcaggccgccgagacccagatcgtcgaggcctatcagatcaag
gaaaaacagagccgttatgcccgcctaagcgagatccgcacgcaggtggtggaacagctg
tgtgccggtgaagcgccgcaatggagcgccgccgacgtcggcgatgccgtcggcagtctg
gaaaaacgcatagtgcgtgagcgtatcctcgacggtgagccgcgtatcgacgggcgtgac
aaggacaccgtgcgtcccatcagcatccgcgtcggcgtgttgccgcgcgtgcatggctcg
gccctgtttacccgcggcgagacccaggcgctggtagccaccacgctcggtactggcaaa
gacgcgcaattgatcgacgccattgaaggtgagcgcaaagagcccttcatgttgcactac
aacttcccgccctactgtgtcggcgagaccggttttgtcggcagccccaagcgccgcgag
atcggtcacggccgtctggccaaacgcggcgtgcaggcagtgatgcccaacatggacgac
tatccctatgtcatccgcgtggtctccgagatcaccgagtccaacgggtccagctccatg
gcctcggtctgcggcagcagcctggcgatgatggacgcgggtatcccgctcaagtccccg
gtggccggtatcgccatggggctgatcaaggacgagcagcgtttcgccgtgctgtccgac
atcctgggtgacgaagatcacctgggcgacatggatttcaaagtggccggcaccaccgag
ggtgtcaccgccctgcagatggacatcaagatcgacggcatcacccgcgagatcatggag
gccgctctggctcaggcccaggacggtcgtatccacattctgggtgagatggccaaggcc
atttcggcgccgcgtgaagagttgtctgaatatgcgccgcgtatcatcaccttcaagatt
aatccggaccgcatccgcgacgttatcggcaagggcggcgccaccatccgcgccctcacc
gaagagaccggcaccaccatcgacctggacgacagcggcacggtcaaggtcgcctccgtc
gacaaggccgccggtgaagaggccaaacgtcgcatcgaagagctggtcgccgacgtggaa
gtgggtaaggtctacgatggcaaggtggccaagctgatggacttcggcgccttcgtcacc
atcctgcccggcaaggacggcctggtgcacatctcgcagatctccaacgagcgcgtcgag
aatgtggccgacaagctgtcggaaggggatacggtcaaggtcaaggtacttgaggtcgac
aagcagggtcgtatccgtctgagcatgaaagcggtggctgaaggctaa
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