Candidatus Tenderia electrophaga: Tel_09665
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Entry
Tel_09665 CDS
T04171
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
tee
Candidatus Tenderia electrophaga
Pathway
tee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tel_09665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tee03019
]
Tel_09665
03009 Ribosome biogenesis [BR:
tee03009
]
Tel_09665
Enzymes [BR:
tee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Tel_09665
Messenger RNA biogenesis [BR:
tee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tel_09665
Ribosome biogenesis [BR:
tee03009
]
Prokaryotic type
rRNA processing factors
Tel_09665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ALP53396
UniProt:
A0A0S2TE64
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All DBs
Position
2106900..2109380
Genome browser
AA seq
826 aa
AA seq
DB search
MLINATQKEELRVALVDGQRLYDLDIELPGREQKKANIYKGKITRIEPSLEAAFVDFGSE
RHGFLPLKEIAPDSYAKQPQDENRRPNIKEILKEGQEVVVQVDKEERGNKGAALTTFVSL
AGRYLVLMPNNPRAGGVSRRIEGEDRSELREAMAAMEIPEGMGVIVRTAGVGKSTEELQW
DLDYLVRLWQAIEKAGQERAAPFLVYQESNLIIRAIRDYFRQDIGEILIDAKEVYDYAQD
FMTQVMPHNKKKVKFYDDSVPLFSRYQVESQIETAFQHEVRLPSGGAIVIDRTEALVSID
INSSRATQGGDIEETALNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPSRNQREVENRL
REALKMDRARVQVGRISRFGLLEMSRQRLRPSLEESIQTTCPRCKGEGSIRNVESLSLSI
LRLIEEEAMKENSARIEAQLPLQVATFLLNEKRNSVSEIEARHGIHVVLLPNPALETPNY
DVRRVKGDDLRDSDATSSYQIIKDIEPEEETSSKRQAYAEQPAVRSVQPATPAPRPTPPA
SSNVSEAQRNAEAGFIKRMWNTLFGNNTPEATQEEEQTARSSDKPSPRRASQSRGGSGRE
RTSSRRGGSQARGRRGGRKQDDDKPQSSATAASEASTEAPGAEATEGEKQQRPAGESRRG
RRGGRRRRKPSGSKPSQQRDGTSSSGDPSNDKPTKADSDKPQKTAPNDAKPNSADAKAKP
KRRSPQTTEETPKATETSPLAAERPKPAGDVAEAGPTQTKSDHPPRDANNAPAKGDAPPK
AEAKPVVDLKPKAPEPVQKSMDLPAPAEERKETPPPVTAEKRGVHE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcaacgcaacccagaaagaagagttgcgtgttgccctcgtcgacggccagcgc
ctctacgacctcgatatcgaacttcccggccgggaacagaaaaaggccaatatctacaaa
ggaaaaatcacccgcatcgaacccagccttgaagccgccttcgtcgacttcggctcggaa
cgccacggatttcttcctttgaaggagattgcccccgatagttatgccaaacagccgcag
gacgaaaaccgccgccccaatatcaaggagattctgaaagagggccaagaggtcgtggtc
caggtggataaggaagaacgcggcaacaaaggcgccgccctgaccacctttgtcagcctg
gccggtcgctatctggtattgatgcccaacaatccgcgcgccggcggcgtatcgcgccgc
atcgagggcgaggatcgcagcgagctgcgcgaggccatggcggccatggagatccccgaa
ggcatgggcgtgatcgtgcgtaccgccggggtgggcaaaagcaccgaagaactgcaatgg
gacctggattacctggtgcgcctatggcaggccatcgaaaaggccggccaggagcgcgcc
gcacccttcctggtgtaccaggagagcaacctgatcatccgcgccatccgcgactatttc
cgccaggacatcggcgagatcctgatcgacgccaaagaggtgtacgactacgcccaggac
ttcatgacccaggtgatgccgcacaacaagaagaaggtgaagttctacgacgacagcgtg
cccctgttctcgcgctaccaggtggagagccagatcgagaccgccttccaacacgaggta
cgcctgccctccggcggcgccatcgtcatcgaccgcaccgaggcgctggtctccatcgac
atcaactcctcgcgcgccacccagggcggcgatatcgaagagaccgccctcaacaccaat
ctggaggcggccgatgagatcgcccgtcaactgcgtctgcgcgacctgggcggcctgatc
gtcatcgacttcatcgacatgaccccgtcacgcaaccagcgcgaggtggaaaaccgcctg
cgcgaggccctgaagatggaccgcgcccgcgtccaggtggggcgcatttcgcgtttcggc
ctgctggagatgtcacgccagcgcctgcgtccgtcgctggaagaatcgatccagaccacc
tgtccgcgctgcaagggcgaaggctcgatccgcaatgtggaatccctctctctctccatc
ctgcgcctgatcgaggaagaggcgatgaaagaaaactcggcccgcatcgaggcccagttg
ccactgcaagtggccacctttctgcttaatgaaaagcgcaattcagtgagcgagatcgaa
gcccgccacggaatccacgtggtgttgctacccaatccggcactggagacgcccaattac
gacgtcaggcgggtcaagggtgacgacctcagagacagtgacgccaccagcagctatcaa
atcatcaaggacatcgaaccggaagaggaaacctcaagcaagcgccaggcctacgccgaa
caacccgcggtcaggagcgtgcagccggcgacgccggcgccgcgtcccacgccccccgcc
tccagcaatgtctcagaagcgcaacgtaatgccgaggccggctttatcaagcgcatgtgg
aacaccctgttcggcaacaacacccctgaagccacccaggaggaagaacaaacggcgcga
tcttctgacaagccgtcgccgcgccgcgccagtcaatcgcgcggcggcagcggccgtgag
cgtacctcgtcacgccggggcgggagccaagcgcgcggccgccgcggcggccgcaagcag
gatgacgacaaaccccaaagcagcgccactgccgcatctgaggcgagcaccgaagcaccc
ggcgcagaggcgaccgagggtgaaaagcagcagcgcccggcgggggaaagccgacgcggt
cgtcgcggcggccggcggcggcgcaaacccagcggcagcaagccgtcgcagcaacgggac
gggacgtcaagcagcggcgacccatctaacgacaagccgacaaaggcggattccgacaaa
cctcagaaaaccgcccccaacgacgccaagccgaactcggcggatgccaaagccaagccc
aagcgccgttctccccagacaacggaggaaacacctaaggcgactgaaacgtccccgctc
gccgcggagcgacccaagccggctggcgacgttgccgaagcaggtcccactcagaccaaa
tctgaccaccccccacgcgacgctaataatgcgcccgctaaaggcgacgcgcctcccaag
gctgaagccaaaccggtggtagacctcaaacctaaggcgcccgaaccggtgcagaaaagt
atggatctaccggcgcctgctgaagaaaggaaggagacacccccgccggtcaccgcggaa
aagcgcggcgtccacgagtag
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