Taylorella equigenitalis 14/56: KUK_0065
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Entry
KUK_0065 CDS
T02604
Symbol
rne
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
teg
Taylorella equigenitalis 14/56
Pathway
teg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
teg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUK_0065 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
teg03019
]
KUK_0065 (rne)
03009 Ribosome biogenesis [BR:
teg03009
]
KUK_0065 (rne)
Enzymes [BR:
teg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
KUK_0065 (rne)
Messenger RNA biogenesis [BR:
teg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KUK_0065 (rne)
Ribosome biogenesis [BR:
teg03009
]
Prokaryotic type
rRNA processing factors
KUK_0065 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CCG17385
UniProt:
I7IIE0
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All DBs
Position
60298..63159
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AA seq
953 aa
AA seq
DB search
MLFNATHQEELRVAIVDGQKLLDIDIETSGREQRKGNIYKGVITRIEPSLEACFVDYGQE
RHGFLPFKEVSRNYHKSGTDHSRISEALEVGQELIIQVEKEERGNKGAALTTYISLAGRY
LVLMPNNPKGGGISRRIDWEERQELREAMSHLELPEGMSLIARTAGIGRTTEELNWDLTY
LMQLWKAIEDAANHYSAPILIYQESSLVIRALRDYFSHDITEILIDTDEIYDQVNAFMQD
VMPDNVAKIKRYRHAVPLFSRFQVEHQIETAYSRHVHLPSGGSIVIDHTEALVAVDVNSA
RSTRGGDIEETAMRTNIEAAEEVARQLRLRDLGGLIVIDFIDMEDSKNQKAVESKLKEAI
QFDRARVQMGKISKFGLMELSRQRLRPSLNEGSHIICPRCNGTGAIRDIESSALNVLRLL
QEEALKENTAVVNAQVPVDVATYLLNEKRQDIVKMEAKNQIRIYLIPSKNLETPHYNIER
IRHDESRMDELPVSYKLTDDSIEEIPSWQEKKDQPKAPEAVVKGIRRQTPAPTPSPKTKE
TNSTELTFWQKILSFFGFARKDQTPEITQTPKVKTPASKSCRKPHSSKTHKSQNHKKSSN
NDEIELKASPSASKTKSDSERLRNKPRKAKSEENSISGFTEVVQEDIATLEKKPQNRRRK
GKSKSDKPVEVVPATETAPITQPSAEPTEIVESDSDQPKRHRNRRGRSRNKNNNNQAFVP
NEVLLEQQDILASESIKENSKSLELSHATPNAIAEPLSNKGVPSGVVSEDVPQDDKVRQN
IEAPSVSETIADFDPQSIGAEVAPKPLPRSQGRRPAEHKQSAMDRSDGRQSAMDRSDAES
VGKDNVEADDSKISRKLENSKSDRSPKSIEKSEQTEHAENKFRITKKEVIQKFVFNKEEL
LSVCESIGMTWIETDPSKIVEIPKVDVKLGRERKPLVPLSNEPLEQVETKIIN
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgttatttaatgcaacacatcaggaagagctccgtgttgctattgtcgatggtcaaaag
ctacttgacattgacattgagacgtctggtcgcgaacagagaaaaggtaatatttacaaa
ggtgtaattactcgcatcgaaccttcacttgaagcatgctttgtcgattatggacaggag
aggcatggatttctaccatttaaagaggtatcccgtaattatcacaaatcaggtactgac
cattctcgtatttctgaagcccttgaagttggtcaggaattaataattcaagttgaaaaa
gaggagcgcggtaacaaaggggctgctcttacaacatacatttctttggctggacgttat
ttagttttaatgccaaataacccaaaaggcggtggcatatctaggcgtattgactgggag
gagagacaggaactacgcgaggctatgtctcatttagaacttccagaaggtatgagccta
attgcacgtacagcaggtatcggtagaaccactgaagagcttaattgggatttaacttat
ttaatgcaactatggaaagctatagaagatgcagctaaccactacagtgctccaatcctt
atttatcaagaatcatctctagtaatcagggctctcagagactatttttctcatgacatt
acagaaattttgattgatacagatgaaatctatgatcaagtaaatgcatttatgcaggat
gtgatgcccgataatgttgccaaaataaagcgatatcgtcatgcagttcctttgttttca
agatttcaagttgagcaccaaattgagactgcgtattcgaggcacgtacatttaccgtct
ggaggttctattgttatcgaccacacagaggctttagttgcagttgatgtaaactctgcc
cgttctactagaggtggtgatatcgaagagactgccatgcgtacgaatattgaggccgca
gaggaagttgctcgccaactaagattacgcgatttaggtggtcttatagtgatcgatttt
atcgacatggaagacagtaaaaatcaaaaagcagttgaatctaaattaaaagaggcaatt
caatttgatagagctagagttcagatgggtaagatttccaaatttgggcttatggaactt
tcacgtcaaagacttagaccatccttaaatgaagggtcgcacataatttgtccacgatgt
aatggtactggagctattcgtgatattgaatctagtgcacttaatgtacttaggctttta
caagaagaagcacttaaggaaaatacagccgttgttaatgctcaggtacctgttgacgtt
gcaacttatcttctaaatgaaaaacgtcaagatatagtcaagatggaggccaaaaatcaa
atacgtatttatttgattccaagtaaaaatttagaaactcctcattacaatattgaacgt
attcgtcatgatgaatctcgtatggatgaacttccagtgagctacaaattgaccgacgat
tctattgaagaaattccatcatggcaggagaaaaaagatcaacctaaagctcctgaggct
gttgttaaagggatacgcagacaaacacctgccccaaccccttctcctaaaactaaggaa
accaactcgacagaacttactttctggcaaaaaatcttgtcattctttgggtttgcacgt
aaagatcaaactcctgaaattacgcaaactcccaaagtcaaaacccccgctagtaaaagc
tgtcgaaaacctcattcaagcaaaacccataaaagtcagaatcataaaaaatcatctaac
aatgatgaaattgaattaaaggcaagtccttctgcttcaaaaactaaatccgactctgaa
cgacttagaaataaaccacgtaaagcgaaatctgaagagaatagtatttctggatttact
gaagtggtgcaagaggacattgccaccctagagaaaaaaccccaaaacagacgtcgtaag
ggaaaatctaaatccgacaaaccggtagaagtagtgcctgcgaccgaaacagccccaata
acccaaccatcggctgaacctacagaaattgtagaaagcgattcagaccaaccaaaacgt
cacagaaatagacggggtcgtagtcgaaataaaaataataacaatcaggcatttgtacca
aatgaagttttgcttgagcagcaagatatattggcctctgaatcgattaaagagaattca
aaatctttagaattgtctcatgctactccaaatgcaattgcagaaccacttagtaataag
ggtgttccatctggagttgtctctgaggatgtacctcaagacgataaagttagacaaaat
attgaggcaccatctgtaagtgaaaccattgcggattttgatcctcagtctattggagca
gaagttgctccaaaacctcttcctcgcagtcagggtagaagacctgctgagcacaaacaa
tctgctatggatcgttctgatggtagacaatctgctatggatcgttctgatgcggaaagc
gtaggtaaggataacgttgaagctgatgactcaaagatttcacgaaaattggaaaattct
aagtctgataggagtcctaaatccatagaaaaatcagagcaaactgaacatgcagaaaat
aaatttagaattaccaaaaaagaagtaattcaaaaatttgtttttaataaagaggagttg
cttagtgtctgcgaaagcattggcatgacttggattgaaactgatccatctaaaatcgtt
gaaatacctaaagttgacgttaaactaggtcgcgaacgcaagcctttagtgccactttca
aacgaaccactagagcaggtagaaactaaaattattaattag
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