Taylorella equigenitalis 14/56: KUK_0917
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Entry
KUK_0917 CDS
T02604
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
teg
Taylorella equigenitalis 14/56
Pathway
teg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
teg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KUK_0917 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
teg03021
]
KUK_0917 (rpoC)
03400 DNA repair and recombination proteins [BR:
teg03400
]
KUK_0917 (rpoC)
Enzymes [BR:
teg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KUK_0917 (rpoC)
Transcription machinery [BR:
teg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KUK_0917 (rpoC)
DNA repair and recombination proteins [BR:
teg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KUK_0917 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
CCG18217
UniProt:
I7IJB6
LinkDB
All DBs
Position
complement(993082..997380)
Genome browser
AA seq
1432 aa
AA seq
DB search
MKGILNLYGQVSNSKDQFDSIRIGIASPDKIRSWSYGEVRKSETINYRTSKPERDGLFCG
KIFGPIKDYECSCGKYKRKKHRGVICEKCGVEVTESKVRRERMGHIELASPVAHIWFLKS
LPSRLGMVLDMTLRDIERVLYFEAWCVTDPGMTPLKRGQIMTSEEYDRRTEEYGDEFEAS
MGAEAIRELLHTIDIDKEVETLREALEVTKSDAKVKKISKRLKVIEGFQKSGIKPEWMIL
EVLPVLPPNLRPLVPLDGGRFAVSDLNKLYINVINRNNRLKRLFELKTAPEIIIRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRQLKSLADNIKGKNGRFRQNLLGKRVDYSGRSVITVG
PQLKLHQCGLPKLMALELFKPFIHNRLYKQGIAKNFNEAKRMVETQDPQVWDILADVIRE
HPVMLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM
EVRTLLLASNNVLFPASGEPSIVPSQDTVLGLYYATRERINGKGEGMFFSDIQEMLRAYN
NGDVGLQSRITVRLNEYTKDEHGNYIPQLKRFQTTVGRALLSEILPKGLPFNVLNKALKK
KEISRLINQSFRRCGLRDTVIFADKLLQSGFSLATKAGISIAMVDMVIPKEKEEILAKAA
AEVKEIDNQYSSGLVTAQERYNNVVDIWGKAGDKVGKKMMETLSTEPVIDRFGDELSQES
FNSIYMMADSGARGSVAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVITEQDCGTSNGYVMKALVEGGDVIEPLRDR
VLGRVAATDILDPDTQQVAIAAGTLLDEDKVELIDKLGIDEVKIRTPLTCETRHGLCAHC
YGRDLGRGYLVNRGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRASLASAVETKSSGRI
GFTGSMRYVTNAKKERVAISRSGEIVVYDDQNRERERHKVPYGATVLVGDGDQVNAGAQL
ATWDPLTRPIVSEYKGRVKFENIEEGVTVAKQVDEITGLSTLVVITPKTRTGKTVLRPQI
KLLSDIGEEVKIVGSEHPVNITFPVGALITVRDGQDVDVGEILARIPQESQKTRDITGGL
PRVVELFEARSPKNAGVLADVTGNVSFGKETKGKQRLIITKVDGEEHEILIPKEKQVLVH
DGQVVNQGELIVDGPPDPHDILRLKGIEALAQYIVNEVQDVYRLQGVKINDKHIEVIVRQ
MLRRVNIVDAGDTDFIPGEQVERAALLNENDRMRQEGKREATFENILLGITKASLSTDSF
ISAASFQETTRVLTEAAIIGKRDKLNGLKENVIVGRLIPAGTGLAYHLARKASSNNQSPM
ISSESSSVLENPFEEVAGAASQAKDIAEDSMSSFFTLPSSSNSSETPETQDQ
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtattcttaacctttacggacaagtatccaacagcaaagaccaattcgattct
attcgaattggaattgcatcaccagataaaatccgttcatggtcttacggggaagttcgt
aagtctgaaactatcaactatcgcacttctaagccagaacgcgacggtttgttctgcgga
aagatatttggaccaatcaaagattacgaatgttcatgcggcaaatataaacgtaaaaaa
catcgtggcgttatttgtgagaagtgcggtgttgaagtaactgaatcaaaagtacgtcgt
gaaagaatggggcatattgagcttgccagtccagttgcacatatttggttcttgaaatca
ttgccatctcgtttaggtatggtgcttgatatgactttacgtgatatcgagcgtgtgctt
tattttgaggcatggtgcgtaactgaccctggcatgacccctcttaaacgtggtcaaata
atgacttcagaagagtacgatcgtagaactgaagaatatggtgatgagtttgaagcatca
atgggtgccgaagctattcgtgagttattgcatactatcgatattgataaggaagttgaa
accttacgtgaagcattagaagttactaagtctgatgcgaaagttaaaaagatttcaaaa
cgtcttaaagttatcgagggcttccaaaaatctggaatcaagcctgaatggatgattttg
gaagtattgccagtattgccacctaacttaagaccattggtaccactagatggcggtcgt
tttgcagtatcagatttaaataaactttatatcaatgttattaaccgaaataaccgtcta
aaacgattatttgagcttaagacagctcctgaaattattattcgcaatgaaaaacgtatg
cttcaagaagccgtggattcattgctagataatggtcgtcgtggtaaggctatgactggg
gcgaataagcgtcagcttaaatctctagcggataatattaaaggtaaaaatggtcgtttc
cgtcaaaacctacttggtaaacgcgtagactattcaggtcgttcagttattacagttggt
ccacaacttaaactacaccaatgtggtttgcctaaacttatggcacttgagttgtttaaa
ccgtttattcataatcgtttgtacaaacaaggcattgcgaaaaacttcaatgaagctaaa
cgcatggttgagactcaagatccgcaagtatgggatatcttagcggatgttattcgtgaa
catccggttatgctaaaccgtgctcctacattgcaccgtcttggtattcaagcatttgag
cctcagttaatcgaaggtaaagctattcaacttcacccattagtttgtgcggcatttaac
gccgacttcgacggtgaccaaatggctgtacacgttccgctttcattggaagctcagatg
gaagtgcgcacacttttacttgcatctaataatgtattgttcccagcaagcggtgaaccg
tcaatcgtaccttcacaagatacggttttaggcttgtattatgcaactcgtgagcgtatt
aatggtaaaggtgagggcatgttcttctctgatattcaagagatgctacgtgcttataac
aacggtgatgttggcttgcaatcacgtattactgtgcgtcttaacgaatatacaaaagat
gaacatggcaattacatacctcaattaaaacgattccaaacaactgttggtcgtgcattg
ttatcagaaatattgccaaaaggcttgccatttaatgttttaaataaagctcttaagaaa
aaagaaatttctcgtttaatcaaccaatcattccgtcgatgcggtttgcgtgatacagtt
attttcgctgataaacttcttcaatcgggctttagcctagcaactaaagcaggtatatct
atcgctatggttgatatggttataccaaaagaaaaagaggaaattcttgctaaagcagcc
gcagaagttaaggaaattgataatcaatattcttctggtcttgtgactgcacaagagcgc
tacaacaacgtggttgatatttggggtaaagcaggcgataaagtaggtaagaaaatgatg
gagactttatcgactgagcccgttatcgacagatttggtgatgaattgtctcaagagtca
tttaactcaatttatatgatggctgactctggagcgcgtggttctgtagctcaaattcgt
cagcttgctggtatgcgtggtctgatggcaaaacctgacggttcaatcatcgaaacgcca
attacggctaacttccgtgaaggattaaacgttcttcaatactttatttcaactcacggt
gcacgtaaaggtttggcggatactgctcttaaaacagcaaactctggatatctgactcgt
cgtcttgtagatgttacacaagatttagttattacagaacaagattgcggtacaagtaat
ggctacgttatgaaggcattagttgaaggtggtgatgtaatcgagccgttacgtgatcgc
gttcttggtcgcgtggcagctactgatattctagatccagatactcaacaagtagctata
gctgcgggcacattattagatgaagataaggtagaacttattgataaacttggtatcgat
gaagttaaaatccgcactccacttacatgcgaaacacgtcatggattatgtgcacattgc
tatggacgtgacttaggtcgtggttaccttgtaaatcgtggagaagctgttggtgtaatt
gcagctcaatcaatcggtgaacctggtacacagttgacgatgcgtaccttccatattggt
ggtgctgcatcacgtgcatcattagcatctgctgtagaaactaaatcttctggacgtatt
ggcttcacaggttcaatgcgatatgtaactaatgcgaaaaaagagcgtgtagcaatttct
cgttctggagaaatcgttgtttatgacgatcaaaatcgtgaaagagaaagacataaagtt
ccttatggtgctacggttttagtaggtgatggtgatcaagtaaatgctggtgctcagcta
gctacatgggatccattgacacgtcctatcgtgtctgaatacaaaggtcgcgttaaattt
gaaaatatcgaagaaggcgttaccgttgccaaacaagttgatgagattacaggtctatca
actcttgtagtgattactcctaaaactcgcactggtaaaactgttcttcgcccgcaaatc
aagcttctaagcgatatcggtgaagaagtcaaaatcgttggatctgaacatccagtaaat
atcacattcccagtcggtgcgttgattactgtgcgtgatggtcaggacgtggacgtaggt
gaaatcctagctcgtatccctcaagagtcacaaaaaacccgcgatattacgggtggtcta
cctcgcgtggttgaattgttcgaagcacgttctcctaaaaatgctggtgttcttgcagat
gttactggcaatgtttccttcggcaaggaaactaaaggtaagcaacgacttatcattact
aaagttgatggagaggagcacgaaatccttattcctaaggagaaacaagttcttgttcac
gacggtcaagttgtaaatcagggtgagctaatagtggacggtccacctgatccgcatgat
attttaagactcaaaggtatagaagcccttgcacagtacatcgttaatgaagttcaagac
gtttatagacttcaaggtgtaaaaatcaatgataaacatattgaagtgattgttagacaa
atgcttcgtcgggtgaatattgttgatgctggtgataccgatttcataccaggcgaacaa
gttgaacgtgccgctttactaaatgaaaatgaccgtatgcgccaagaaggtaaacgtgaa
gctacattcgaaaatattcttttaggtattacgaaagcttctctttctaccgattcattt
atatctgcagcttctttccaagagactactcgtgtgcttactgaagcagctatcattggc
aaacgtgacaaacttaacggtcttaaagaaaacgttattgtaggtagattgattccagct
ggtactggtcttgcttaccacttagcgagaaaagcgtcatctaataaccaaagcccaatg
atctcttcggaatcctcgagcgttttagagaatccgttcgaagaggtggctggtgccgct
agtcaagcgaaggacatagccgaagattcaatgtcatcattctttacattgccatcttca
agcaattcaagcgaaactcctgaaacacaagatcagtag
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integrated database retrieval system
