Nostocoides sp. HKS02: GKE56_03975
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Entry
GKE56_03975 CDS
T06295
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
teh
Nostocoides sp. HKS02
Pathway
teh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
teh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GKE56_03975 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
teh03400
]
GKE56_03975 (uvrA)
DNA repair and recombination proteins [BR:
teh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GKE56_03975 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GKE56_03975 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_16
nSTAND1
AAA_21
AAA_25
AAA_22
DnaJ_CXXCXGXG
APS_kinase
nSTAND3
NACHT
ATPase
Viral_helicase1
DUF3090
cobW
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QGN57176
UniProt:
A0A6I5X7X5
LinkDB
All DBs
Position
847817..850960
Genome browser
AA seq
1047 aa
AA seq
DB search
MERVTSALPVRRHQHDQLIVRGAREHNLKDVSVELPRDSMIVFTGLSGSGKSSLAFDTIF
AEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYD
YLRLLFARAGRPHCPVCGEPITRQSPQQIVDRLLELPERTRFQVLAPVVRARKGEYVDLF
AELQSKGFARARVDGEVVSLTEPPKLEKQVKHTIDVVVDRLVAKGGDSGAKRRLTDSVET
ALGLAGGVLVVEFVDKDAKDPERERRFSEKMACPNDHPLAMDEVEPRSFSFNSPFGACPK
CTGLGTELEVDPELLVPDEDLTLSQGAIAPWASTSGSAEYFQRVMTALGEDLKFGMDTPW
HALPERAKEALLHGQNYKVHVRYRNRYGRERSYTTGFEGVVPFVKRRHSETDSEWSRERY
EGFMREVPCPECGGARLKPESLAVLVGGHSISAICALAIADCAKFLKEVDFTTRERQIAE
RVIKEIDARLGFLLDVGLDYLSLDRPAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSI
GLHQRDNHRLIETLTRLRDLGNTLIVVEHDEDTIATADWVVDIGPGAGEHGGQVVHSGSV
QGLLEHPDSVTGKYLSGRLEIPTPLTRRPQERGRQVTVVGAREHNLHGVDVSFPLGNLVA
VTGVSGSGKSTLVNDILYNVLANKLNGARHVPGRHKTVKGLEHLDKVVHVDQSPIGRTPR
SNPATYTGVFDAIRKLFATTTEAKIRGYQPGRFSFNVKGGRCDACSGDGTIKIEMNFLPD
VYVPCEVCHGARYNRETLEVHFKGKTIADVLDMPIEEAAEFFAAVPAIARHMTTLSDVGL
GYVRLGQPAPTLSGGEAQRVKLASELQKRSTGRTVYVLDEPTTGLHFEDIRKLLVVLQGL
VDKGNTVIVIEHNLDVIKNADWVVDMGPEGGNGGGRLVAEGTPEEVAAVEDSHTGRFLAP
ILARSARTAQRPTGNRATKKTAAAAPTKKTATQKATPRTTATAKVPTGTTVKKAVTKKAA
TTKAATTKAATKTAKKAATKAATTPRR
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgtgacttccgccttgcccgtccgccgccaccagcacgaccagctcatcgtc
cggggtgcccgtgagcacaacctcaaggatgtgtcggtcgagctgccccgcgactcgatg
atcgtcttcaccgggctctccgggtcgggcaagtcgtccctggcgttcgacaccatcttc
gccgaggggcagcgacgctacgtcgagtccctctcggcgtacgcccggcagttcctcggc
cagatggacaaacccgacgtcgacttcatcgaggggttgtccccggcggtgtcgatcgac
cagaagtcgaccaaccgcaacccgcgctcgaccgtgggcaccatcaccgaggtctacgac
tacctccggctgctcttcgcgcgcgccggccgcccgcactgcccggtctgcggtgagccg
atcacccgccagagcccgcagcagatcgtcgaccggctgctcgagctgcccgagcgcacc
cgcttccaggtgctcgcgccggtggtccgcgcgcgcaagggggagtacgtcgacctcttc
gccgagctccagagcaagggcttcgccagggcgcgggtcgacggcgaggtcgtctcgctc
accgagccgcccaagctcgagaagcaggtcaagcacaccatcgacgtcgtcgtcgaccgg
ctcgtcgccaagggtggcgactcgggggccaagcgtcgcctcaccgactcggtcgagacc
gcactcggtctggccggcggtgtgctcgtcgtcgagttcgtcgacaaggacgccaaggac
cccgagcgcgagcggcggttctcggagaagatggcctgccccaacgaccaccccctggcg
atggacgaggtcgagccgcgctcgttctcgttcaacagcccgttcggcgcgtgccccaag
tgcaccggcctcggcaccgagctcgaggtcgaccccgagctgctcgtgcccgacgaggac
ctcaccctgagccagggcgccatcgcgccgtgggcctcgaccagtggttcggccgagtac
ttccagcgggtcatgacggccttgggggaggacctcaagttcggcatggacacgccgtgg
cacgcgctcccggagcgcgccaaagaggccctgctgcacggccagaactacaaggtccac
gtgcgctaccgcaaccgatacggccgggagcgctcctacacgaccggcttcgagggcgtc
gtgcccttcgtcaagcggcgccactccgagaccgactccgagtggagccgcgagcggtac
gaaggcttcatgcgcgaggtgccctgccccgagtgtggtggcgcgcgcctcaagcccgag
tcgctcgccgtgctcgtcggtggccacagcatctcggcgatctgcgcgctcgcgatcgcc
gactgcgccaagttcctcaaggaggtcgacttcaccacccgcgagcgccagatcgccgag
cgggtcatcaaggagatcgacgcgcgcctcgggttcctcctcgacgtcggcctcgactac
ctctccctcgaccggccggccggcacgctgtccggcggcgaggcccagcgcatccgtctg
gccacccagatcgggtccggcctggtcggtgtcctctacgtcctcgacgagccgagcatc
gggctgcaccagcgcgacaaccaccggctgatcgagacgctcaccaggctgcgagacctc
ggcaacaccctgatcgtggtcgagcacgacgaggacaccatcgccacggccgactgggtg
gtcgacatcggccccggcgcgggcgagcacggtggccaggtcgtgcactcgggctccgtg
cagggcctgctcgagcaccccgactccgtgacggggaagtacctctccgggcgcctggag
atccccacgccactgacccgccgcccccaggagcggggtcgccaggtcaccgtcgtcggt
gctcgcgagcacaacctccacggggtcgacgtctcgttcccgctgggcaacctcgtcgcc
gtgaccggggtgtccggctccggcaagtcgaccttggtcaacgacatcctctacaacgtg
ctggccaacaagctcaacggcgcgcgccacgtcccgggtcgccacaagaccgtcaagggc
ctcgagcacctcgacaaggtggtgcacgtcgaccagagcccgatcggccggaccccgcgc
tcgaacccggccacctacaccggcgtgttcgacgcgatccgcaagctgttcgccacgacg
acggaggccaagatccgtggctaccagccggggcgcttctcgttcaacgtcaagggcggc
cgctgcgacgcctgttccggtgacggcacgatcaagatcgagatgaacttcctccccgac
gtctacgtcccgtgcgaggtctgtcacggcgcgcgctacaaccgcgagacgctcgaggtg
cacttcaagggcaagacgatcgctgacgtcctcgacatgccgatcgaggaggccgccgag
ttcttcgccgcagtgcccgcgatcgcgcgtcacatgacgacgctgagcgatgtcgggctc
gggtacgtgcggctcggccagccggcgccgacgctctcaggtggtgaggcgcagcgcgtc
aagctggcctccgagctgcagaaacgctcgaccggccgcacggtctacgtgctcgacgag
ccgaccaccgggttgcacttcgaggacatccgcaagctcctggtcgtcctgcaggggctg
gtcgacaagggcaacacggtcatcgtcatcgagcacaacctcgacgtcatcaagaacgcc
gactgggtcgtcgacatggggcccgaggggggcaacggaggtgggcgcctggtggccgag
ggcacgcccgaggaggtcgctgcggtcgaggacagccacaccggccggttcctggccccg
atcctcgcgcgcagcgcccgcacggcacagcgccccacggggaaccgggccaccaagaag
accgccgccgcggcgccgaccaagaagaccgccacgcagaaggccacccctcgcacgaca
gcgacggccaaggtcccgacgggcacgacggtcaagaaggcggtcaccaagaaggctgcg
accacgaaggctgcgaccacgaaggctgcgaccaagacggccaagaaggctgcgaccaag
gcggccacgacgccgcgccggtga
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