Nostocoides sp. HKS02: GKE56_11490
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Entry
GKE56_11490 CDS
T06295
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
teh
Nostocoides sp. HKS02
Pathway
teh03030
DNA replication
teh03430
Mismatch repair
teh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
teh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GKE56_11490
03430 Mismatch repair
GKE56_11490
03440 Homologous recombination
GKE56_11490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
teh03032
]
GKE56_11490
03400 DNA repair and recombination proteins [BR:
teh03400
]
GKE56_11490
Enzymes [BR:
teh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GKE56_11490
DNA replication proteins [BR:
teh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GKE56_11490
DNA repair and recombination proteins [BR:
teh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GKE56_11490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_16
Mg_chelatase
RuvB_N
AAA_5
AAA_22
AAA_30
DUF2914
Motif
Other DBs
NCBI-ProteinID:
QGN58404
LinkDB
All DBs
Position
complement(2388934..2390073)
Genome browser
AA seq
379 aa
AA seq
DB search
MSVWRDVIGQDAAVATLQRAAQDRAAMTHAWLLTGPPGSGRSVAARAFAGALECPQHGCG
DCRECRTAVDGTHADVDVIATEGLSIKVEQARELAAMSALRPSVGPWRVIIIEDADRLTE
RAADALLKAIEEPVARTVWILCAPSLEDVVITIRSRSRHVRLRTPPVEAVAELLHRRDGV
EMPMARYAARAAQCHVGLARRLARDEDARVRRTDVIGLAGRIHGVGDAIGAAADLAAIAE
QESTAAAAERDAGERQRLLEVLGADPSARTQPPHIRSQLSGLEREQKARATRHSRDVLDR
SLVDLLSVYRDALVLHSGAAIGLVNQDSLPMVQALARSMGPDQLLQAMDAIGTARERIGL
NVAPLLALEAMAISLRVPR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtctggcgcgacgtcatcggtcaggacgccgctgtcgccacgctccagcgggca
gcgcaggaccgcgccgccatgacccatgcgtggcttctcacgggccccccgggctccggt
cggtcggtggccgcacgcgcgttcgccggcgctctcgagtgcccccagcatggctgcggc
gactgccgggagtgccgcacggcagtcgacggcacccacgccgatgtcgacgtcatcgcc
accgaggggttgtcgatcaaggtcgagcaggcccgcgagctcgccgcgatgtcggcgttg
cggccctcggtcggcccgtggcgggtcatcatcatcgaggacgccgaccggctgaccgag
cgcgccgccgatgccctgctcaaggccatcgaggagccggtcgcgcgcaccgtctggatc
ctctgcgcgccctcgctcgaggacgtcgtcatcaccatccgctcgcgctcgcgccacgtc
cggctgcgcacgcccccggtcgaggccgtggccgagctgctgcaccgccgcgacggggtc
gagatgcccatggcccggtatgccgcgcgggcggcgcagtgccatgtcgggctcgcccgg
cgcctcgctcgtgacgaggatgcccgggtcaggcgcaccgacgtcatcgggctcgccggc
cgcatccacggagtcggcgacgcgatcggggccgctgccgacctggccgcgatcgccgag
caggagtccaccgccgcggcagccgaacgcgacgccggcgaacggcagcgcctcctcgag
gtgctcggggccgatccgtcggcgcggacccagccaccccatatccgcagccagctctcg
gggctcgagcgcgagcagaaggcgagggcgacgcggcactcccgcgacgtgctcgaccgg
tcgctggtggacctgctgtcggtctaccgcgacgcgctcgtcctgcacagcggtgcggcc
atcggcctggtcaaccaggacagccttcccatggtgcaggcgctcgcccgctcgatgggc
ccggaccagctgctgcaggcgatggacgccatcggcacggcgcgtgagcgcatcggcctc
aacgtcgccccgctgctggccctcgaggcgatggcgatctcgctccgagtgccgcggtga
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