Nostocoides sp. HKS02: GKE56_11885
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Entry
GKE56_11885 CDS
T06295
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
teh
Nostocoides sp. HKS02
Pathway
teh03030
DNA replication
teh03430
Mismatch repair
teh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
teh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GKE56_11885
03430 Mismatch repair
GKE56_11885
03440 Homologous recombination
GKE56_11885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
teh03032
]
GKE56_11885
03400 DNA repair and recombination proteins [BR:
teh03400
]
GKE56_11885
Enzymes [BR:
teh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GKE56_11885
DNA replication proteins [BR:
teh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GKE56_11885
DNA repair and recombination proteins [BR:
teh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GKE56_11885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
Rad17
AAA_14
AAA_18
AAA_16
Mg_chelatase
AAA_19
TsaE
zf-CXXC
AAA_28
nSTAND3
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
QGN58470
LinkDB
All DBs
Position
complement(2470457..2472532)
Genome browser
AA seq
691 aa
AA seq
DB search
MSTALYRRYRPESFADVIGQEHVTEPLMQALRTGRVNHAYLFSGPRGCGKTTSARILARC
LNCEQGPTPTPCGTCDSCVALARGGTGSVDVIEIDAASHGGVDDARDLRERASYGPAQSR
FKIYIIDEAHMVTPQGFNALLKIVEEPPEHVKFVFATTEPDKVIGTIRSRTHHYPFRLVP
PGQLTDYMQRLCESEGVAVAPGVLSFVTRAGGGSVRDSLSVLDQLIAGSDDEGLTYESAA
ALLGFTDGELLDAIIDAFAAGDAAGVFHQVDRVIETGLDPRRFVEDLLERLRDLIVVAAV
PDGASSVLRGVPEDQLERMRQQSSAFGSGGLSRAADIVNAGLTEMTGATAPRLQLELICA
RVLLPGASGESGYAARLDRLERRLDVEGVPSAAKAHRPEPARPQQAVSQPAVQAPEPVTP
EPVAPEPVTPEPVTPEPAAPEPAAPEPAAPEAVAPEPAAPAPTPAPAETPGVEARPSGGL
DTAAIRRAWPDILGWIFKHKRTTWTLLSEHATVHDYDGSKVVLGISTVGIANTFRHGPHA
DLVRQALIDVLGVEARVEGIPVPDAALSVGTGEPHPSVSVASPEPAADRTPTPTPETGDA
GWASAPTAPGTGPSWASASDPEPGVAPSSAVSPLERARAEVAAEAPHGASQLRVADDSAA
SADDEDIEALGEVGRPVIERLLGGKVIDEGP
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgccctgtaccgccgctaccggcccgagtccttcgccgacgtgatcggtcag
gagcacgtcaccgaacccctcatgcaggccctgcgcaccggccgggtcaaccacgcgtac
ctgttctccggcccgcgcggctgtggcaagacgaccagtgcacgcatcctggcccgctgc
ctcaactgcgagcaggggccgacccccaccccgtgcggcacctgcgactcctgcgtggcc
ctggctcgcggcggcaccggcagcgtcgacgtcatcgagatcgacgcggccagccacggc
ggcgtcgacgacgcccgcgacctgcgcgagcgggcgtcctacggcccggcgcagagccgg
ttcaagatctacatcatcgacgaggcccacatggtcaccccgcagggcttcaacgccctg
ctcaagatcgtcgaggagccgcccgagcacgtgaagttcgtgttcgccacgaccgagccc
gacaaggtcatcggcaccatccggtcgcgcacccaccactacccgttccggctggtcccg
cccggtcagctcaccgactacatgcaacggctctgcgagtccgagggtgtggcggtggct
cccggtgtgctgtccttcgtcacccgggcgggtggcggctccgtgcgcgactcgctgtcg
gtcctcgaccagctcatcgcgggttcggacgacgagggcctgacctacgagagcgcggcc
gccctgctgggcttcaccgacggcgagctgctcgacgcgatcatcgacgccttcgccgcc
ggtgacgcggcgggggtcttccaccaggtcgaccgggtcatcgagaccggccttgacccc
cggcgcttcgtcgaggacctcctcgagcggctgcgcgacctcatcgtcgtggctgccgtg
ccggacggcgcctcgtccgtgctccgaggcgtcccggaggaccagctcgagcggatgcgt
cagcagtcgtcggccttcggcagcggcggcctgtcccgtgccgccgacatcgtcaacgcc
gggctcaccgagatgaccggggcgaccgccccgcgcctgcagctcgagctgatctgcgcg
cgggtgctcctgcccggcgcctccggcgagagtgggtatgccgcgcgcctggaccgcctc
gagcgtcgcctcgacgtcgagggagtcccgtcggctgcgaaggcgcaccgccccgagccg
gcccgcccccagcaggccgtctcccagcccgcggttcaggcccccgagccggtcaccccc
gagccggtcgcgcccgagccggtcacccccgagccggtcacccccgaacccgcagccccc
gaacccgcagcccccgaacccgcagcccccgaggcggtcgcccccgagcccgcggccccg
gctccaacccccgctccggctgagacccccggtgtcgaggctcgcccgtccggcggtctc
gacacggccgcgatccggcgggcctggcccgacatcctgggctggatcttcaagcacaag
cgcaccacctggaccctgctgtccgagcacgccacggtccacgactatgacggttccaag
gtcgtcctgggcatctccaccgtcggcatcgccaacaccttccgccacggcccccacgcc
gacctggtccgccaggcgctgatcgatgtcctcggggtcgaggcccgggtcgaggggatt
cccgtccccgacgcggcgctctcggtgggcactggtgagccgcacccctcggtgtcggtc
gcgtcacccgagcccgccgctgaccgcacccccacgccgacacccgagacgggcgacgcg
ggctgggcgagcgctccgaccgcacccggcaccgggccgtcgtgggcgagcgcgtccgac
cccgaacccggggtcgccccgtcttccgccgtctcgccactcgagcgggcccgggctgag
gtggcggctgaggcgccgcacggggcatcccagctccgcgtggccgacgacagcgccgcg
agcgccgacgacgaggacatcgaggctctcggcgaggtggggcgcccggtgatcgagcgg
ctcctggggggcaaggtcatcgacgaaggtccctga
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