Nostocoides sp. HKS02: GKE56_13010
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Entry
GKE56_13010 CDS
T06295
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
teh
Nostocoides sp. HKS02
Pathway
teh03030
DNA replication
teh03430
Mismatch repair
teh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
teh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GKE56_13010
03430 Mismatch repair
GKE56_13010
03440 Homologous recombination
GKE56_13010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
teh03032
]
GKE56_13010
03400 DNA repair and recombination proteins [BR:
teh03400
]
GKE56_13010
Enzymes [BR:
teh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GKE56_13010
DNA replication proteins [BR:
teh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GKE56_13010
DNA repair and recombination proteins [BR:
teh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GKE56_13010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
QGN59544
LinkDB
All DBs
Position
complement(2692686..2693819)
Genome browser
AA seq
377 aa
AA seq
DB search
MKFRVEREVLADAVTWVARGLPARPPVPVLAGLLIEANDEGTLTLSAFDYEVSAKITVAA
DVSESGTVLVLGRLLADISRNLPSKPVDISTDGSKVSVTCGSSRFSLMQMPADDYPTLPT
SPAPSGTVAGDVFTQAVAQVSIAADRGDTLPILTGVRVEIDGEKMTLLATDRYRLAMREL
TWNPEASDASHVALVPARTLSETAKALGASGTVDLALGSSAGGEGLVGFEAGQRRTTTRL
LDGEYPKVTSIFPTTVETESVIKTADLVEAVKRVALVAERNTPVRLRFSEGQVAIEAGTG
DDAQASEAVEAVLTGPEIEIAFNPQFLLDGLGAVGTEYSRLSFTQPSRPAVLSGQDKEDG
DADTSYRYVLMPVRFAS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtttcgggtcgaacgtgaggtgctcgccgacgccgtgacgtgggtggctcgtggc
ctgccagcccgcccgccggtgcccgtgctcgccggactgctcatcgaggccaacgacgag
ggcacgctgaccctgtcggcgttcgactacgaggtctccgccaagatcaccgtcgcggcc
gacgtgtccgaatcgggcaccgtgctggtcctcggccggctcctggccgacatctcgcgc
aacctgccgtccaagccggtcgacatctcgaccgacgggtccaaggtctcggtgacctgc
ggctcctcacggttcagcctcatgcagatgccggccgacgactaccccacgctgcccacc
tcgcccgcgcccagcggcaccgtggccggcgacgtcttcacccaggccgtcgcccaggtc
tccatcgccgccgaccgcggcgacaccctgccgatcctcaccggggtcagggtcgagatc
gacggcgagaagatgaccctgctcgccaccgaccgctaccggctggcgatgcgcgagctc
acctggaaccccgaggccagcgacgcgtcccacgtcgcgctcgtcccggcccgcaccctg
tccgagaccgccaaggcgctcggcgcgtccggcacggtcgacctcgccctgggctcctcg
gcgggcggtgaggggctggtcgggttcgaggccggccagcgccgcacgacgacccggctg
ctcgacggcgagtaccccaaggtcacctcgatcttccccacgaccgtcgagaccgagtcg
gtcatcaagaccgccgacctggtcgaggccgtcaagcgcgtggccctggtcgccgagcgc
aacacccccgtgcggcttcgcttcagcgagggccaggtcgccatcgaggcgggcaccggc
gacgacgcccaggcgtccgaggccgtcgaggccgtgctcaccggtcctgagatcgagatc
gcgttcaacccccagttcctgctcgacggcctcggcgcggtcggcaccgagtactcgcgc
ctgtcgttcacccagccctcgcgcccggccgtcctgtccggccaggacaaggaggacggc
gatgccgacacctcctaccgctatgtcctgatgcctgttcgcttcgcgagctga
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