Tessaracoccus palaemonis: KDB89_05040
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Entry
KDB89_05040 CDS
T08695
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
tej
Tessaracoccus palaemonis
Pathway
tej02024
Quorum sensing
tej03060
Protein export
tej03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
KDB89_05040 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KDB89_05040 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KDB89_05040 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tej02044
]
KDB89_05040 (ffh)
Enzymes [BR:
tej01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
KDB89_05040 (ffh)
Secretion system [BR:
tej02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
KDB89_05040 (ffh)
Eukaryotic Sec-SRP protein
KDB89_05040 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
nSTAND3
CbiA
AAA_22
cobW
ArsA_ATPase
AAA_18
APS_kinase
AAA_17
AAA_33
TsaE
AAA_31
DUF6596
AAA
NACHT
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QXT63834
LinkDB
All DBs
Position
1138798..1140330
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AA seq
510 aa
AA seq
DB search
MFDTLQDRLSTVFKGLRSKGRLTEADLDATMREIRIALLEADVNLGVVKEFVAAVKERSL
GAELSKALNPSQQIIKIVNEELVSILGGEARTIRFAKRPPTVIMLAGLQGAGKTTLAGKL
AKWLAGSQHSPLLVAADLQRPNAVNQLQIVGQRAGVQVFAPEPGNGVGDPVDVARRAIEH
ARTKLHDVVIVDTAGRLGVDAELMQQAADIKAAVNPDETLFVVDAMIGQDAVNTAKAFDE
GVGIDGVVLTKLDGDARGGAALSIARVLGKPIMFASNGEALADFDMFHPDRMASRILGMG
DVLTLIEQAEKTFDAEQSRAAAEKLMGRGKFGLQDFLSQMQQLRKMGPMSKILGMLPGAG
QFKDAINEIDEKEIDRVEAIIYSMTPKERDDVSILNGSRRARIAKGAGVQVSDVNKLVTR
FVEARKMMESMAGGGMPGMPGMPGMGRTRGASATKKAPGKARKGKKARPAKGRQLPQQRP
QAAPEAPQSMDDFQLPPDLAKMFEQNKPKF
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacactctgcaggaccggctctcgacggtgttcaaggggctccgctccaagggg
cggctgaccgaggccgacctcgacgccacgatgcgcgagatccgcatcgcgctgctcgag
gcagacgtcaacctcggcgtggtcaaggagttcgtcgcggcggtcaaggaacgctcgctc
ggcgcggagctctccaaggcgctcaacccgtcgcagcagatcatcaagatcgtcaacgag
gagctcgtctccatcctgggcggcgaggcccgcaccatccgcttcgcgaagcggcccccg
acggtcatcatgctcgccggcctgcagggcgcgggtaagacgacgctggccggcaagctc
gccaagtggttggccggctcgcagcactccccgctgctggtggccgccgacctgcagcgc
cccaacgccgtcaaccagctgcagatcgtcggccagcgcgccggcgtgcaggtcttcgcg
cccgaacccggcaacggcgtcggcgaccccgtcgacgtggcccgtcgggccatcgagcac
gcccgcaccaagctgcacgacgtcgtgatcgtcgacaccgcgggccggctgggcgtcgac
gccgagctgatgcagcaggccgccgacatcaaggccgccgtcaaccccgacgagaccctg
ttcgtcgtcgacgcgatgatcggccaggacgccgtcaacaccgccaaggccttcgacgag
ggcgtcggcatcgacggcgtcgtgctgaccaagctcgacggcgacgcccgcggcggcgcg
gccctgtcgatcgcccgcgtgctcggcaagccgatcatgttcgcgagcaacggcgaggcg
ctggccgacttcgacatgttccaccccgaccggatggcctcgcgcatcctcgggatgggc
gacgtcctcaccctgatcgagcaggcggagaagaccttcgacgccgagcagtcgcgcgcc
gctgccgagaagctgatgggccggggcaagttcggcctgcaggacttcctctcgcagatg
cagcagctgcgcaagatgggcccgatgagcaagatcctcggcatgctgccgggcgccggg
cagttcaaggacgccatcaacgagatcgacgagaaggagatcgaccgcgtcgaggcgatc
atctactcgatgacgcccaaggagcgcgacgacgtctcgatcctcaacggctcgcgccgc
gcccgcatcgccaagggcgccggcgtgcaggtctcggacgtcaacaagctggtcacgcgc
ttcgtcgaggcccgcaagatgatggagtccatggccggcggcggcatgcccggcatgccc
gggatgcccggcatgggcaggacccgcggggccagcgcaacgaagaaggcccccggcaag
gcccgcaagggcaagaaggcccgtcccgcgaagggtcgccagctcccgcagcagcgcccg
caggccgcccccgaggcgccgcagagcatggacgacttccagctgccgccggatctggcg
aagatgttcgagcagaacaagcccaagttctag
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