Tessaracoccus palaemonis: KDB89_05660
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Entry
KDB89_05660 CDS
T08695
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tej
Tessaracoccus palaemonis
Brite
KEGG Orthology (KO) [BR:
tej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tej03009
]
KDB89_05660 (rimO)
Enzymes [BR:
tej01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KDB89_05660 (rimO)
Ribosome biogenesis [BR:
tej03009
]
Prokaryotic type
ribosomal protein modification factors
KDB89_05660 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QXT63941
LinkDB
All DBs
Position
1262469..1263893
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AA seq
474 aa
AA seq
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MTQHLVHIASLGCARNDVDSEELAARLELGGFTLTDDPTSAETVVVNTCGFVEQAKKDSI
DTLLAAADLKDGGTVRSVVAVGCMAERYGVQLADELPEADAVLGFDDYADIADRLKGILD
GDRHISHVPRDRRTLLPLTPMARQAAADRIATPGHRHEPLPAGLAPATGPRALRRRLSGG
PSANLKIASGCDRRCAFCAIPAFRGSYLSRPIDELIAEAQWLAEQGVRELFLVSENTSSY
GKDLGPDTRLEALLPELSLVDGIDWIRVSYLQPAEIRPSMLDAMLGTEKVVPYFDLSFQH
ASPTVLRSMRRFGDPDSFLSLISTIRDAAPAAGIRSNVIAGFPGETARDVEILRDFIVEA
NLDVMGVFGYSDEEGTEGVTLPGHLEPAEVEERRAMLADLAIEVCEARAADRIGEEIVVL
VESDEDGESVGRGAHQAPETDGSTTLSGFAGRVGELVRAVVVDAAGIDLIAEAQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcatctcgtccacatcgcctccctcgggtgcgcccgtaacgacgtcgactcc
gaggaactcgccgcccgtctcgaactcggcgggttcaccctcaccgacgacccgacgagc
gccgagaccgtcgtcgtcaacacatgcgggttcgtcgagcaggccaagaaggactccatc
gacaccctgcttgccgccgccgacctgaaggacggcggcaccgtccgttcggtcgtcgca
gtgggatgcatggcggagcggtacggcgtgcagctcgccgacgagctgccggaggccgac
gcggtgctcggcttcgacgactacgccgacatcgccgaccgcctcaaggggatcctcgac
ggcgaccgccacatctcccacgtgccgcgcgaccgccgcacgctcctgccgctgaccccc
atggcccgacaggcggccgctgaccgcatcgcgacgcccggccaccggcatgagccgctg
cccgcagggctggccccggccaccggcccgagggcgctgcgcaggcggctgtccggcggc
ccgtccgccaacctgaagatcgcctcgggctgcgaccggcggtgcgccttctgcgccatc
ccggccttccgcggctcctatctctcccgcccgatcgacgagctcatcgccgaggcgcag
tggctcgcggagcagggcgtcagggagctgttcctcgtctccgagaacacgtcgtcctac
ggcaaggacctggggccggacacccggctcgaggcgctgctgccggagctgtcgctggtc
gacgggatcgactggatccgcgtcagctacctgcaacccgccgagatccgcccctccatg
ttggacgccatgctgggcaccgagaaggtcgtgccgtacttcgacctcagcttccagcac
gcgtccccgaccgtgctgcgctccatgcgtcggtttggcgacccggacagcttcctctcg
ctcatctcgaccatccgcgacgccgcacccgccgccggcatccgcagcaacgtcatcgcc
gggttccccggggagaccgcgcgcgacgtcgagatcctgcgcgacttcatcgtcgaggcc
aacctcgacgtgatgggcgtgttcggctactccgacgaggagggcaccgagggcgtcacg
ctgccgggccacctcgagcctgcagaggtggaggagcgccgcgcgatgctcgccgatctg
gccatcgaggtctgcgaggcgcgcgcggccgaccgcatcggcgaggagatcgtcgtgctg
gtcgagtcggacgaggacggcgaatcggtcggccgaggcgcccaccaggccccggagacc
gacggatccacaaccctctccgggttcgccggtagggtgggggagttggtccgcgccgtc
gtcgtcgacgcggcaggaatcgatctcatcgcggaggcgcagtga
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