Tessaracoccus palaemonis: KDB89_05700
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Entry
KDB89_05700 CDS
T08695
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tej
Tessaracoccus palaemonis
Pathway
tej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDB89_05700 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tej03019
]
KDB89_05700 (rny)
Messenger RNA biogenesis [BR:
tej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KDB89_05700 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
KH_2
ATG14
Motif
Other DBs
NCBI-ProteinID:
QXT63948
LinkDB
All DBs
Position
1268198..1269808
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AA seq
536 aa
AA seq
DB search
MVPWLGWLTAAILTIVVVVLAVLLWRRGAQVAAERENWERRSTADLASVKESARAAAETL
REDAERVLNQSRERLQEEREDLTRRRAELDSSISTQRAELREERASQERREARLHEREDR
LAADLEGLEVRVQRLDERRAEVREQEARAAATREETSRELERVAGLSHEDARAEVIGEAE
RQARLSAAQIARDIESGAKRDADRRARNIVVTAIQRVASEQTNESVVSTVQLPSDEMKGR
IIGREGRNIRAFEQITGVNILIDDTPESVLLSSFDPVRREIARLTLVDLVADGRIHPVRI
EEVYERSERRITERIDRAAEDALLEVGITDLDPDLIPILGSLAYRTSYGQNVLRHLVESA
HLAGVMAAELGLDVASCKRAAFLHDIGKALTHEIEGPHALIGAELLRRHGESEDVVHAVE
AHHNEVEPHTVEAVLTQAADAISGSRPGARRESLEAYVERMETLEHLAIAHEGVQRAYAM
QAGREVRVMVNPEAVDDIGAQALARDIAREVEENLSYPGQIRITVVRESRATQTAH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggtgccctggcttggatggttgaccgctgcgatcctgacgatcgtggtcgtcgtcctc
gccgtgctgctgtggcggcgcggcgcgcaggtcgcggcggagcgggagaactgggagcgt
cgctccacggccgacctcgcatcggtgaaggaatctgccagggcggcggcggagacgctg
cgcgaggacgcggaacgcgtgctgaaccagtcccgcgagcggctgcaggaggaacgggag
gacctgacccggcgacgcgcggaactggactcgtcgatctcgacccagcgtgcagagctg
cgcgaggagcgagccagccaggagcgccgtgaggcgcggctgcacgagcgtgaagaccgg
ctcgccgccgacctcgagggcctcgaggtacgcgtccagaggctcgatgagaggcgcgcc
gaggtccgcgagcaggaggcccgcgccgcggcgacccgcgaagaaacctcccgtgagctg
gagcgggtcgcggggctcagccacgaggacgcccgcgccgaggtgatcggtgaggccgag
cgtcaggccaggctgtccgccgctcagatcgcccgtgacatcgagtccggagcgaagcgc
gacgccgacaggcgggcccgcaacatcgtggtcactgccatccagcgggtcgcatccgag
cagaccaatgagtcggtcgtcagcacggtgcagctgcccagcgacgagatgaagggacgc
atcatcggccgcgagggccgcaacatccgtgccttcgaacagatcacaggcgtcaacatc
ctcatcgacgacacgccggagtccgtcctgctgagcagcttcgaccccgtccgccgcgag
atcgcgcgcctgaccctcgtcgacctcgttgccgacgggcgcattcacccggtgcgcatc
gaagaggtgtacgagcgcagcgaacgccgcatcaccgagcggatcgacagggcggcggag
gacgcgctgctcgaggtgggcatcaccgacctcgacccggacctgatccccatcctcggc
tcgctggcctaccggacctcctacgggcagaacgtgctgcgccacctggttgagtccgcg
cacctggccggcgtgatggccgccgagctgggcctggacgtggccagctgcaagcgcgcc
gccttcctgcacgacatcggcaaggcgctcacccacgagatcgagggtccccatgccctg
atcggcgcggaactgctacgccgccatggcgagagcgaggacgtggtgcatgccgtcgag
gcccaccacaacgaggtggagccccacacggtcgaggcggtcctcacgcaggcggccgac
gccatctcggggtcccgccccggagcccggcgcgagtcgctggaggcgtatgtggaacgg
atggagaccctcgagcacctcgccatcgcgcacgagggtgtgcagcgcgcctacgccatg
caggcgggtcgagaggttcgggtgatggtgaaccccgaggccgtcgacgacatcggggca
caggcgctcgcccgcgacatcgcgcgagaggtggaggagaacctcagctacccggggcag
atccgcatcacggtggtgcgggagtcccgggcgacgcagacggcccactga
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