Tessaracoccus palaemonis: KDB89_05975
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Entry
KDB89_05975 CDS
T08695
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
tej
Tessaracoccus palaemonis
Pathway
tej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KDB89_05975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tej03400
]
KDB89_05975
Enzymes [BR:
tej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KDB89_05975
DNA repair and recombination proteins [BR:
tej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KDB89_05975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecC_C
Exonuc_V_gamma
Motif
Other DBs
NCBI-ProteinID:
QXT63999
LinkDB
All DBs
Position
complement(1334710..1337688)
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AA seq
992 aa
AA seq
DB search
MALQVVRGNRFGTLMDGLADALRRLQNDPFARVRVLVGYPTTGRVVGQEVARRLGISAGV
DYLTPAQLLGRLAEPAGLARDRSRWLGSPLDLAVWEAVTSMTDEFPVLARAAHPERPGGR
RALATRLARLLRWYLDHDPDLLAGWLEDADEGPGGAELPERLAWQPELLRRSVEALEVDP
CELLDALLAAARADAVPTLAFGLDELTIPRTRLLAALAESREVTAFQPSAAGDAEWIRAL
GAEVHPARDEPAAPPHLTLHGSHGPARQVEVLRDELARAFAEDPTLEPRDVAIVCPRPGR
YATLLDSAFAAVPGRAHPGRSLRVAPVGGRESNPVLECVVQLLRLGESRASATAITELVT
SSPIAHRWRLEDRESVTEIVEAAGIHWGMDAGHRASFDLTVTQNTWMRGLDRVLVGLAVS
PRHDSGLSLTGTDAVGSSDLPIVGALCELVSRMRRLIAQTAAPVTVPEWVATTRQLLADF
VGVPFADEWLVLQVHAALARLAADHAGSPTELTRHEFAHLLEATERSTRRVSAGNGSLQV
IDLGELAHVSFRLVAMIGITDDVVPGRGAAQPDALEVAAVDRREVRLRQLRAHALAAERL
IVVRQTRSERTGDEVADGAAVDWLVDALGSPVTRIEHPATAMSEANFDTRPSFDEAARAG
ALARRGAATLPPAHTRRRHDARRLPVGDPPAQVDLGQLERFLVDPAKAFLRSAAGISAFP
GASLSDELPLALDGLEQWKISDELLNARIEGRDPADVAARLRETESLPPGELAARAFRRA
DAKATELWGEAAPLFERPATDHRIDLRVPVPGIGEVRVVDTVSCRGGEPVSATLSKGAEK
FIRPWLESLALGASGDPTPANLVRYEAGADPFLQQPTTRRVGGPDAAVATDRLTAVLLAF
ALGQHRLIPVPADAALAYASQHARGTLTPRDWRGSPGWRHPKWSKPGDAWPLFFSDVGEL
FDDAPLPEDPALGQTSAFQSWALALYSGFGGL
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctgcaggtcgtgaggggcaaccggttcggcaccctcatggatggactggccgat
gcgctgcgccgtctgcagaacgacccgttcgcgagggtgcgggtcctcgtgggttacccc
accaccggacgcgtcgtcgggcaggaggtggcccggaggctcgggatctccgccggcgtg
gactacctgacgcccgcccagctcctcggccggctggcggagcccgctggcctcgcccgc
gacaggtcgcgctggctcggcagccctctcgaccttgccgtctgggaggccgtgacctcc
atgacggacgagttccccgtcctggcccgcgcggcgcaccccgaacgcccaggcggccgg
cgggcgctggccacccggctggcgaggctcctgcgctggtacctcgaccacgatcccgat
ctgctcgccggctggctggaggacgccgacgagggccccggcggcgctgaactgccggag
cggctcgcctggcagccggaactgctcaggcgcagcgtcgaggcgctcgaggtcgatccc
tgtgagctgctcgacgcgctcctggcggccgcccgcgccgacgcggtgccgacgctggcg
ttcgggctcgacgagctgacgatcccccgcaccaggctgctcgcggcgctggccgagtcc
agggaggtgacggccttccagccgtcggccgccggagacgcggagtggatccgcgccctg
ggcgccgaggtccaccccgcgcgagacgaacccgccgcgccgccccacctcacgctgcac
ggctcgcacggacccgcccggcaggtggaggtcctgcgcgacgagctcgcgcgcgcgttc
gcggaggacccgacgctcgagccgcgcgacgtcgccatcgtgtgcccgcggccggggcgg
tacgccacgctgctcgactccgcgttcgcggccgtccccggccgggcgcacccgggccgg
agcctgcgggtggcgcccgtcggggggcgggagtcgaaccccgtgctcgagtgcgtcgtg
cagctcctgcgcctcggcgagtcccgcgcctccgcgacggccatcaccgagctcgtcacg
tcgtccccgatcgcgcaccgatggcgtctggaggaccgcgagtccgtcacggagatcgtc
gaggccgcggggatccactggggcatggacgccggccaccgcgcctccttcgacctcacg
gtgacgcagaacacctggatgcgggggctcgaccgggtgctcgtcggcctcgcggtgtcc
ccccgccacgactccgggctgtcgctgaccggcaccgacgccgtggggtcctcggacctg
ccgatcgtcggcgccctctgcgagctggtctctcggatgcggcggctcatcgcccagacc
gcggcccccgtcacggtgccggagtgggtggcgacgacccgccagctcctcgccgacttc
gttggcgtccccttcgccgacgagtggctcgtgctgcaggttcatgcggcgctggcccgg
ctcgccgccgatcatgcgggctcgcccaccgagttgacgcgccacgagttcgcgcatctc
ctcgaggcgaccgagcgttccacccgccgggtctcggccgggaacgggtcgttgcaggtc
atcgacctcggcgagctggcgcacgtgtcgttccggctggtcgccatgatcggcatcacc
gacgacgtcgtgcccggccgcggcgcagcccagccggacgccctcgaggtggccgccgtc
gaccgacgcgaggtccgcctccgccagctccgcgcgcacgcgctggccgccgagcggctg
atcgtcgtgcgccagacgcggtcggagcgcaccggcgatgaggtcgccgacggcgcagcc
gtcgactggctggtcgacgccctcggctcgccggtcacccggatcgagcacccggccacg
gcgatgtcggaggccaacttcgacacgcggccaagcttcgacgaggccgcgcgcgccggc
gcgttggcccgacgcggcgcggccaccctccccccggcgcacacccgccgcagacacgac
gcccgcaggctgccggtcggcgacccgccggcgcaggtggacctcggccagctggagcgc
ttcctcgtcgacccggcgaaggcgttcctccgctcggccgccgggatctccgcgttcccc
ggggcgagcctcagcgacgagctcccgctggccctcgacggcctcgagcagtggaagatc
agcgacgagctcctcaacgcccgcatcgagggccgcgacccggcggatgtcgcggcccgg
ctgcgggaaaccgagtcgctgccgccgggcgagctggccgcgcgcgcgttccggagggcc
gacgcgaaggccaccgagctgtggggcgaggccgccccgctgttcgagagacccgccacc
gaccaccgcattgacctcagggtccccgtgccgggcatcggcgaggtccgcgtcgtcgac
accgtctcgtgccgcggcggggagccggtgtccgcgacgctgtcgaagggcgcagagaag
ttcatccgcccgtggctcgagtcccttgcgctcggcgcgtcgggcgatccgacgcccgcc
aacctcgtgcgctacgaggccggcgcggaccccttcctccagcagcctaccacgcgccgc
gtcggcgggccggacgcggccgtggcgaccgacaggctcaccgcggtgctcctggccttc
gcgctcggccagcaccggctgatccccgttcccgcggacgcggcgctggcctacgcgagc
cagcacgcgcgcggaacgctgaccccccgcgactggcgcggctcacccggttggcgccat
ccgaagtggtcgaagccgggcgacgcgtggcccctgttcttctcggacgtcggcgagctg
ttcgacgacgcgccgctgccggaggacccggctctcgggcagaccagcgccttccagagc
tgggccctggccctctactccggattcggaggcctctga
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