Tessaracoccus palaemonis: KDB89_06300
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Entry
KDB89_06300 CDS
T08695
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tej
Tessaracoccus palaemonis
Pathway
tej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDB89_06300 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tej03021
]
KDB89_06300 (rho)
03019 Messenger RNA biogenesis [BR:
tej03019
]
KDB89_06300 (rho)
Transcription machinery [BR:
tej03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KDB89_06300 (rho)
Messenger RNA biogenesis [BR:
tej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KDB89_06300 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Spore_III_AA
VWA_2
ResIII
AAA_22
AAA
DHquinase_II
Motif
Other DBs
NCBI-ProteinID:
QXT64060
UniProt:
A0ABX8SN44
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All DBs
Position
1406713..1408566
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AA seq
617 aa
AA seq
DB search
MHGQSTASRLHGRRFVLSESVELTSMKLVELKSVASSMGIKGVSGMRKGDLVGAIQAAGK
GGAEHQRRASRPEPQQAELVSERAPQAEAPQKRQQAEQQEKRQEREPREQQDRRQQQGDR
PQEKRPQGDQQQTDGGGSRNNNRRRRNRDRQAQAETNEEVGELLDAALGGSQPKAAAQPA
PEQRQSAPEPIAYDDDQGGSRRSRRRRNRDRNDRGGNNNRRSRSGQGFDRMEAEPTIAED
DVLAAISGIVDILDNYAFVRTTGYLPGPADAYLSMSTVRRYGLRRGDVVTGAIRTPKEGE
RKEKFSPMVRLDTVNGDAPEKAKGRPEFAKLTPLYPQERLRLETVQTNLTGRIIDLVSPI
GKGQRGLIVSPPKAGKTMIMQAIANAIAANNPEVHLMVVLVDERPEEVTDFQRTVSGEVI
ASTFDRPAEDHTTVSELAIERAKRLVELGHDVVVLLDGITRLGRAYNLAAPASGRILSGG
VDSAALYPPKKFFGAARNIENGGSLTILATALIETGSKMDEVIFEEFKGTGNMELRLRRE
LADKRIFPAIDVDASGTRREDLLLGRDELNIIWKLRRALSGLDDQAALETLKSRMTKTHN
NHDFLLSVLKTTPAQEG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcatggacagtccacagcgagccggctccatggaaggagattcgtcttgagcgaatct
gtcgaactcaccagcatgaagctggtcgagctgaagtccgtcgcctcctcgatgggcatc
aagggcgtctcgggtatgcgcaagggcgacctcgtcggcgcgatccaggccgcgggcaag
ggcggggcggagcatcagcgccgcgcgtcccggccggagccccagcaggccgagctggtg
agcgaacgcgctccgcaggcggaggcgccccagaagcgccagcaggccgagcagcaggag
aagcgccaggagcgcgagccccgcgagcagcaggacaggcgccagcagcagggtgaccgc
ccgcaggagaagcgcccccagggcgaccagcagcagaccgacggcggcggcagccgcaac
aacaaccgtcgtcgccgcaaccgtgaccgccaggctcaggccgagacgaacgaggaggtc
ggcgagctgctcgacgcggcgctcggcgggtcccagccgaaggcggctgcgcagccggcc
cccgagcagcgccagtcggcgcccgagcccatcgcctacgacgacgaccagggtggttcg
cgccgcagccggcgacgccgcaaccgggaccgcaacgaccgcggcggtaacaacaaccgc
cgctcgcgctccggccagggcttcgaccggatggaggccgagccgacgatcgccgaggac
gacgtgctcgcagccatctccggcatcgtcgacatcctcgacaactacgccttcgtccgc
accaccggctacctgcccggcccggcggacgcctacctctccatgtcgacggtgcgccgc
tacggcctgcgccgcggcgacgtggtcaccggcgccatccgcacacccaaggagggggag
cgcaaggagaagttcagcccgatggtgcgcctcgacaccgtcaacggtgacgcccccgag
aaggccaagggccgcccggagttcgccaagctgacgccgctgtacccgcaggagcggctc
cgcctcgagacggtccagacgaaccttacgggccggatcatcgacctggtctcgcccatc
ggcaagggccagcgcggactgatcgtctccccgcccaaggccggaaagaccatgatcatg
caggcgatcgccaacgcgatcgcggccaacaaccccgaggtccacctgatggtcgtcctg
gtcgacgagcgacccgaggaggtcaccgacttccagcgcacggtctccggcgaggtcatc
gcgtccacgttcgaccgcccggccgaggaccacacgacggtctccgagctggccatcgag
cgggcgaagcggctggtcgagctcggtcacgacgtcgtcgtcctcctcgacggcatcacg
cggctgggccgcgcctacaacctcgcggcgcccgcgtccggtcgcatcctctcgggtggc
gtcgactccgcggccctgtacccgccgaagaagttcttcggcgccgcgcgcaacatcgag
aacggtggctcgctgaccatcctggccaccgcgctcatcgagaccggatcgaagatggac
gaggtgatcttcgaggagttcaagggcacgggcaacatggagctgaggctccgccgcgag
ctcgccgacaagcgcatcttcccggcgatcgacgtcgacgcctccggcacccgccgtgag
gacctgctgctgggacgcgacgagctgaacatcatctggaagctgcggcgcgccctgtcc
ggcctcgacgaccaggcggccctagagacgctgaagtcgcgcatgaccaagacgcacaac
aaccacgacttcctgctcagcgtcctcaagaccaccccggcgcaggaaggctga
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