Tessaracoccus palaemonis: KDB89_06615
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Entry
KDB89_06615 CDS
T08695
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tej
Tessaracoccus palaemonis
Pathway
tej03030
DNA replication
tej03430
Mismatch repair
tej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDB89_06615 (dnaE)
03430 Mismatch repair
KDB89_06615 (dnaE)
03440 Homologous recombination
KDB89_06615 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tej03032
]
KDB89_06615 (dnaE)
03400 DNA repair and recombination proteins [BR:
tej03400
]
KDB89_06615 (dnaE)
Enzymes [BR:
tej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDB89_06615 (dnaE)
DNA replication proteins [BR:
tej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KDB89_06615 (dnaE)
DNA repair and recombination proteins [BR:
tej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KDB89_06615 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QXT64119
LinkDB
All DBs
Position
1473612..1477151
Genome browser
AA seq
1179 aa
AA seq
DB search
MSDSFVHLHCHTEFSMLDGAARVKDLFSGAEQMKMPALAITDHGNLYGAYEFYKASKAFD
VKPIIGLEAYLTPRTHRSERKRVQFGDGTGDDVASKGAYTHMTMWAADKVGMHNLFKLST
YSSLEGFFYKPRADRELLNTYGKGLIATTGCPSGEVQTFLRLGQYDNAVAAAAEFRDIFG
EGNFYVELMDHGLEIETRVRQGLLQVARDLSLPLVATNDLHYVHADDADSHDTLLCVSAG
SRKAQADRFRFDGNGYYLKSPEEMRHLFREFPEACDNTLAIAERVETSFDEGIGTYMPRF
DVPEGETEESWFRKEVDRGLHFRYPNGIPREVLDRAEFETGIIVQMGFSGYFLVVADFIN
WAKHNGVRVGPGRGSGAGSMCAYAMRITDLDPLEHGLLFERFLNPERVSMPDFDIDFDDR
RRGEVITYVTEKYGSEYVAQIITYGSIKAKAAVKDAARVLDMPFAIGEQITKAMPPDVMG
KGVPLGDLFNEEHKRYAEGAEFRELYQSNADVRTVVDTARGIEGLKRQWGVHAAGVIMSR
APIADVVPLMKREADGAIITQFDYPGCESLGLIKMDFLGLRNLTVLADALHNIELNRGTE
VELESLALDDEKTFTLLQRGDTLGVFQLDGGPMRALLRSMQPDCFDDISAVGALYRPGPM
GADSHNKYARRKTGREPVEPIHPELAEPLESILGETYGLIVYQEQVMAIAQKLAGYTLGG
ADMLRRAMGKKKKSELDKQYETFSAGMIERGYSKDAIKTLWDILLPFSDYAFNKAHSAAY
GLVSYWTAWLKANYPVEYMAALLQSVRDDKDKSALYLAECRHMGIEVLPPDVNSSEVAFT
PVGEHIRFGMGAVRNVGDKVVTAWVEERTKLGPAKDFYDFLDKAPLLMCNKRVVESLVKA
GAFDELGHTRRSLMGIFEAAVDSIIDLKKNAENGQDGFDFGFDDGAGADEASPLHEAVPD
VDEWDRRTKLAFEREMLGLYVSDHPLNGLEHVLQANSDRSIASAVAEDGYRGNTKLCGLI
TSVNRRVNKAGNIWAQVVLEDLGNSIEVTVFPRVYDQVAMHLAPDTIVAVDGVVESGEDR
GRMRAQNVIAPHVSAEGNVGPLALTLPAVRCTPGVVGRLKSILAQYPGAAEVHLNLRTGE
QIKTFRLGDGFRVELTSALFADLKAVLGPSCVGVGRESS
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggattcgttcgtccacctgcactgccacaccgagttctccatgctggacggtgcg
gccagggtcaaggacctcttcagcggagccgagcagatgaagatgccggcgctggcgatc
accgaccacggcaacctgtacggggcctacgagttctacaaggcgtccaaggccttcgat
gtgaagcccatcatcgggctcgaggcgtacctgacgccccgcacgcaccgctccgagcga
aagcgggtccagttcggcgacggcacgggcgacgacgtcgcctccaagggcgcctacacc
cacatgacgatgtgggcggccgacaaggtcggcatgcacaaccttttcaagctgtcgacg
tactcgtccctggagggcttcttctacaagcctcgcgccgaccgggagctcctcaacacc
tatggcaaggggctgatcgccaccaccggctgcccgtccggcgaggtccagacgttcctc
cggctcggccagtacgacaacgccgtggccgccgccgccgagttccgcgacatcttcggc
gagggcaacttctacgtcgagctgatggaccacggcctcgagatcgagacccgggtgcgt
cagggcctgctgcaggtcgccagggacctgagcctgccgctggtcgccaccaacgacctc
cactacgtgcacgccgacgacgccgactcgcacgacaccctgctgtgcgtctccgccggc
tcccgcaaggcgcaggcggaccggttccgcttcgacggcaacggctactacctcaagagc
cccgaggagatgcggcacctcttccgcgagttccccgaggcctgcgacaataccctggcg
atcgccgagcgcgtcgagacgagcttcgacgagggcatcggcacgtacatgccgcgcttc
gatgtccccgagggggagaccgaggagtcctggttccggaaggaggtcgaccggggactg
cacttccgctacccgaacggcatcccccgggaggtcctcgaccgtgccgagttcgagacc
gggatcatcgtccagatgggcttctccggctacttcctcgtcgtcgcggacttcatcaac
tgggccaagcacaacggggtccgcgtcggccccggccgaggctccggagctggctcgatg
tgcgcgtacgccatgcgcatcaccgacctcgacccgctcgagcacggcctgctcttcgag
cgcttcctcaaccccgagcgcgtctcgatgcccgacttcgacatcgacttcgacgaccgc
cgccgcggcgaggtcatcacctacgtcaccgagaagtacggcagcgagtacgtcgcgcag
atcatcacatacggctccatcaaggcgaaggccgccgtcaaggacgccgcccgcgtgctc
gacatgcccttcgccatcggtgagcagatcaccaaggccatgcccccggacgtgatgggc
aagggtgtcccgctcggcgacctcttcaacgaggaacacaagcgctacgccgagggcgcc
gagttccgcgagctctaccagtccaacgccgacgtgcgcacggtggtcgacacagcccgc
ggcatcgagggcctgaagcgccagtggggcgtgcacgccgccggcgtcatcatgagccgg
gcccccatcgccgacgtcgtgccgctcatgaagcgcgaggccgacggcgcgatcatcacg
cagttcgactacccgggctgcgagtccctcggcctgatcaagatggacttcctgggcctg
cgcaacctcacggtgctggccgacgcgctgcacaacatcgagctgaaccgtggcaccgag
gtggagctcgagagcctcgcgctcgacgacgagaagacgttcaccctgctccagcggggc
gacactctcggcgtgttccagctcgacggcggccccatgcgggcgctgctgcgctcgatg
cagcccgactgcttcgacgacatctccgccgtcggcgcgctctaccggccgggcccgatg
ggcgccgactcgcacaacaagtacgcccggcgcaagacggggcgcgagcccgtggagccg
atccacccggagcttgccgagccgctggagtcgatcctgggcgagacctacggcctgatc
gtgtaccaggagcaggtcatggccatcgcacagaagctcgccggctacacgctcggcggc
gcggacatgctccgccgcgcgatgggcaagaagaagaagtccgagctggacaagcagtac
gagaccttctcggccggcatgatcgagcgcggctactccaaggacgccatcaagacgctg
tgggacatcctgctgccgttctccgactacgccttcaacaaggcccactcggccgcctac
gggctcgtgtcctactggacggcctggctcaaggccaactaccccgtcgagtacatggcg
gcgctgctgcagtcggtccgcgacgacaaggacaagtcggccctctacctggccgagtgc
cgtcacatgggcatcgaggtgcttcctccggacgtgaactcctcggaggtggccttcacc
ccggtgggtgaacacatccgcttcggcatgggtgcggtgcgcaacgtgggcgacaaggtg
gtgacggcctgggtcgaggagcgcacgaagctcggccccgcgaaggacttctacgacttc
ctggacaaggctccgctgctgatgtgcaacaagcgcgtcgtggagtcgctggtcaaggcg
ggcgccttcgacgagctcggccacacgcgccggtccctgatggggatcttcgaggcagcg
gtggactcgatcatcgacctcaagaagaacgccgagaacggccaggacggcttcgacttc
ggcttcgacgacggggcgggcgccgacgaggccagcccgctgcacgaggccgtcccggac
gtcgacgagtgggaccgccgcaccaagctggcgttcgagcgggagatgctcggcctgtac
gtctccgaccatccgctcaacgggctcgaacacgtgctgcaggccaacagcgaccgatcc
atcgcctccgccgtcgccgaggacggctaccgcggcaacaccaagctgtgcggactgatc
acctcggtcaaccgtcgcgtgaacaaggccggcaacatctgggcgcaggtggttctcgag
gatctcggcaactcgatcgaggtcacggtgttcccacgggtctacgaccaggtcgcgatg
cacctcgcgccggacaccatcgtggccgtcgacggcgtcgtcgagtccggcgaggacagg
ggacgcatgcgagcgcagaacgtcatcgccccgcatgtcagcgctgagggcaacgtcggg
ccgctcgcgttgaccctgcccgccgtgcgctgcacgccgggcgtggtcggcaggctcaag
tcgatcctcgcgcagtaccccggcgcggccgaggtccacctcaatctccggacgggggaa
cagatcaagacgttccggctcggcgacggcttccgcgtcgagctcacctctgcgctgttc
gccgacctcaaggccgtgctcggcccatcgtgtgtcggcgtcgggagggagagctcgtga
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