KEGG   Tessaracoccus palaemonis: KDB89_07105
Entry
KDB89_07105       CDS       T08695                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tej  Tessaracoccus palaemonis
Brite
KEGG Orthology (KO) [BR:tej00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tej02048]
    KDB89_07105
Enzymes [BR:tej01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     KDB89_07105
Prokaryotic defense system [BR:tej02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   KDB89_07105
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII T1RH-like_C DEAD AAA_16
Other DBs
NCBI-ProteinID: QXT64202
LinkDB
Position
1580586..1583693
AA seq 1035 aa
MSTVGQIERKTQDRVVKLFQEQLGYSYLGKWEDREGNSNIEEALLRANLQARAVDDDLIG
RALHVLRNEAAVGGNRSLYEANRKVYELLRYGVKVKRDVQSNFETVWLIDWTKPEANDFH
MAEEVSIAGEHNKRPDVLLYVNGIALGVVEFKRSKVSVSEGIRQNIGNQRADFIRPFFST
VQLMFAGNDVEGLRYGVIETPEKYWLEWKEPQDSPVGADLAEPLDKAFVQMCSKERLLEL
IHDFIVFDSGVKKTARHNQYFGVKAAQARIAKREGGIIWHTQGSGKSLTMVWLAKWIREH
QQAARVLIITDRTELDEQIEKVFGGVNEDIYRTTSGADLLSAINKTDPWLIGSLVHKFRG
SDDDKDLDDAGEEFIAELRSRLPANFSPKGNLYIFVDEAHRTQSGKMHKAMKELLPGAMF
IGFTGTPLLKADKATSIETFGSFIHTYKFDEAVADGVVLDLRYEARNVDQELKGAAQIDK
KFEHWTQGMTDLSKARLKKRWGTMQKVFSAKSRADMIVQNILWDFDTQPRLVSGRGNAML
VGESIYQACKFYELFVAAGFKGKVAIVTSYVPNASDISKEDSGEGATEKLRQYDIYRQML
ADYFGEPADRASTPEKVAQFEKEVKEKFIKEPGQMRLLIVVDKLLTGFDAPSATYLYIDK
KMRDHGLFQAICRVNRLDGDDKTYGYIIDYRDLFNSLENAITDYTSGALDGYEKQDIEGL
LKDRTDQAKKDLDEALERIRALCEPVAPPKGTLEYQHYFVADIPGDAEQIKANENKRVEL
YKSVAALVRTYGVLANEMEQAGYAAAEAKQIKDEVAHYVAVRDEVELGAGENIDMKQFEA
GMRSLLDTYIQADPVEDVAIFDKGLVELIVERGECALDTLPPGIRKNPEAAAETIINNVR
KTIVDEHAMNPKYYDSMSSLLDALILQAKQEALDYKEYLARLLELAKKVGKKESDTVYPA
WARTGAQKALVDFGFAPPELAIQVDTTVMTSKHHDWVGNKMKEKVVARALHKVLPDGFDR
FDELFDLVRARDEYR
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgagcaccgtaggtcagatcgagcgcaagacgcaggatcgcgtggtcaagctgttccag
gagcagcttggttactcgtacctgggtaagtgggaggaccgtgagggcaactcgaacatc
gaggaggctctgcttcgtgccaacctgcaggctcgtgccgtcgatgacgacctcattggc
cgcgccctgcacgtgctgcgcaatgaagccgcggtgggcggcaaccgctcgctgtacgag
gccaaccgcaaggtctacgagctgttgcgctacggcgtgaaggtcaagcgtgacgtgcag
tcgaatttcgagaccgtttggctgatcgactggaccaagcctgaggccaacgacttccac
atggccgaagaagtctcgatcgcgggcgagcacaacaagcgccctgacgtcttgctctac
gtcaacggcatcgccctgggcgttgtggagttcaagcgctcgaaggtgagcgtcagcgag
ggtatccgtcagaacatcggcaaccagcgggccgacttcatccgtccgttcttctcgacg
gtccagctgatgtttgccggcaacgacgttgagggtctgcgctacggcgtgatcgagacg
ccggagaagtactggctggagtggaaggaaccgcaggacagcccagtcggcgccgacctc
gctgaacccctcgacaaggcgttcgtccagatgtgctcgaaggagcgcctcctcgaactc
atccatgacttcatcgtcttcgactcgggtgtaaagaagaccgcccggcacaaccagtac
ttcggcgtgaaggctgcgcaggccaggatcgccaagcgcgagggtggcatcatctggcac
acccagggctcgggcaagagcctgaccatggtctggctggccaagtggatccgcgagcac
cagcaggctgcccgcgtcctgatcatcaccgaccgcaccgaactcgacgagcagatcgag
aaggtcttcggcggggtcaatgaggacatctaccgcaccacttcgggagcggacctgctg
agcgcgatcaacaagaccgacccctggctgatcggctcgctggtccacaagttccgtggc
agcgacgacgacaaggacctcgacgacgctggcgaggagttcatcgccgaactgcgctcg
cggctgccggccaacttcagcccgaagggcaacctgtacatcttcgtcgacgaggcgcac
cgcacccagtcgggcaagatgcacaaggccatgaaggagctgctgcctggcgcgatgttc
atcggcttcaccggtacgccgctcctcaaggctgacaaggcgaccagcatcgaaaccttc
ggctcgttcatccacacctacaagttcgatgaggctgtggctgacggagtcgtgctcgac
ctgcgctacgaggcccgcaacgtcgaccaggagctcaagggcgctgcccagatcgacaag
aagttcgagcactggactcagggcatgactgacctgagcaaggcccgcctcaagaagcgt
tggggcaccatgcagaaggtgttcagcgccaagagccgcgccgacatgatcgttcagaac
atcctgtgggacttcgacacccagccgcgcctggtctccgggcggggtaacgccatgctg
gttggcgagtcgatctaccaggcctgcaagttctacgagctgttcgtggccgccggcttc
aagggcaaggtcgcgatcgtgaccagctatgtcccgaacgccagcgacatctccaaggag
gactcgggcgagggtgcgaccgagaagttgcgccagtacgacatctaccggcagatgctg
gccgactacttcggtgagcctgccgaccgtgcctcgacgccggagaaggtggctcagttc
gagaaggaggtcaaggaaaagttcatcaaggagccgggccagatgcgcctgctcatcgtg
gtggacaagctcctgaccggcttcgacgccccgagcgccacctacctgtacatcgacaag
aagatgcgcgaccacggcctgttccaggccatctgcagggtcaaccgcctcgacggcgac
gacaagacctacggctacatcatcgactaccgcgacctgttcaactcccttgagaacgcc
attaccgactacacctcgggcgcgttggacggctacgagaagcaggacatcgaaggcctg
ctcaaggaccgcaccgaccaggcgaagaaggacctcgacgaagcgctggagcggatccgt
gccctgtgtgagccggtcgccccgccgaagggcacgctggagtaccagcactacttcgtc
gccgacatccctggcgatgccgagcagatcaaggccaacgagaacaagcgcgtcgagctg
tataagtcggtcgccgcgctggtccgcacctacggggtgctggccaacgagatggagcag
gcgggctatgccgcggccgaggccaagcagatcaaggacgaggtcgctcactacgtcgcc
gtccgtgacgaggttgagctcggtgctggcgagaacatcgatatgaagcagttcgaggcc
ggtatgcgctcgctgctcgacacctacatccaggccgacccggtcgaggacgtggcgatc
ttcgataagggcttggtcgagctgatcgtcgaacgtggtgagtgcgcgctggacacgctg
ccgcccgggatccgcaagaaccccgaggctgcggccgagacgatcatcaacaacgtccgc
aagacgatcgtcgacgagcacgccatgaacccgaagtactacgactcgatgtcgtcgctg
ctcgacgccctgatcctgcaggccaagcaggaggcgctcgactacaaggagtacctcgct
cggctgctcgagctggccaagaaggtcggcaagaaggagtccgacacggtctatccggcg
tgggccaggaccggggcgcagaaggcgctggtcgattttggtttcgcgccgcccgagttg
gcgatccaggtcgacaccaccgtgatgacctcgaagcaccacgactgggtcggcaacaag
atgaaggagaaggtcgtcgccagggctctgcacaaggtgctgccggacggcttcgaccgc
ttcgatgaactgtttgacctggtgagggcacgcgatgagtaccgctaa

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