Tessaracoccus palaemonis: KDB89_08900
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Entry
KDB89_08900 CDS
T08695
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tej
Tessaracoccus palaemonis
Brite
KEGG Orthology (KO) [BR:
tej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tej03016
]
KDB89_08900 (truB)
Enzymes [BR:
tej01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KDB89_08900 (truB)
Transfer RNA biogenesis [BR:
tej03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KDB89_08900 (truB)
Prokaryotic type
KDB89_08900 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QXT61906
LinkDB
All DBs
Position
complement(1958094..1958957)
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AA seq
287 aa
AA seq
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MSSPSGLVIVDKPSGVTSHQVVGRLRRLLGTRRIGHAGTLDPMATGVLILGVNRATRLLG
HLALHDKEYLATVRLGESSPTDDADGEVVAVADASGLTGADVDAALEPQRGDILQRPSAV
SAIKVDGKRAYARVRSGEDVVLKERPVTVSRLEVLDVRPAGRCLDVDLAVECSSGTYVRA
IARDLGDALSVGGHLTALRRTRIGGYGIDDAVALGDDPPHLMGMAEAARLSFPVVDLTEA
EARDVGFGRSLARVVPADPTGVIGPDGDLLALYRPSGNGSVPVAVLV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcaccgtcagggctggtgatcgtcgacaagccgtcgggggtcaccagccaccag
gttgtcgggcgccttcgcaggctgctcggcacccgcaggatcgggcatgccgggacgctg
gacccgatggccaccggggtgctcatcctgggagtcaaccgggccacccgtctgctcggc
cacctggccctgcacgacaaggagtacctcgcgaccgtgcggctgggggagtcgtccccc
accgatgacgcggacggcgaggtcgtcgccgtggcggacgcctcgggtctcaccggggcc
gacgtggacgcggccctcgagccgcagcgcggcgacatcctccagcggccctcagccgtg
tccgcgatcaaggtcgacggcaaacgcgcctacgcgcgcgtccgctccggcgaggacgtc
gtgctcaaggagcgccccgtcaccgtctcccgactcgaggtcctcgacgtgcgccccgcc
ggccgttgcctcgacgtcgacctcgccgtcgagtgctcgtccggcacctacgtccgggcc
atagcccgtgacctgggcgacgccctgtcggtgggcggccacctgacagcgctgcgccgc
acccgcatcggcggctacggcatcgacgacgccgtggcgctcggcgacgatccgccgcac
ctgatgggcatggccgaggccgcccggctcagctttcccgtcgttgacctgaccgaggct
gaggcccgcgacgtcggcttcggccgatccctggcacgcgtcgtgccggccgacccgacc
ggcgtcatcggcccggacggcgacctcctggcgctctaccgtccgtcgggcaatggctcg
gttccggttgcggtgctggtgtga
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