Tessaracoccus palaemonis: KDB89_11945
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Entry
KDB89_11945 CDS
T08695
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tej
Tessaracoccus palaemonis
Brite
KEGG Orthology (KO) [BR:
tej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tej03032
]
KDB89_11945 (topA)
03400 DNA repair and recombination proteins [BR:
tej03400
]
KDB89_11945 (topA)
Enzymes [BR:
tej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KDB89_11945 (topA)
DNA replication proteins [BR:
tej03032
]
Prokaryotic type
DNA Topoisomerases
KDB89_11945 (topA)
DNA repair and recombination proteins [BR:
tej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KDB89_11945 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QXT64389
LinkDB
All DBs
Position
complement(2616688..2619369)
Genome browser
AA seq
893 aa
AA seq
DB search
MMASKRLVIVESPTKATKIAGYLGRDYIVESSRGHVRDLPTSASEVPAKYKGEKWARTGV
NVSDDFQPIYVVSADKKSTIKDLKAKLKEVDELLLATDGDREGEAIAWHLMEELKPKVPV
KRMVFHEITKPAIEEAVRNPRELDVDLVDAQETRRILDRLYGYEVSPVLWKKVMPRLSAG
RVQSVATRLVVDKERERIAFVPASYWDLDVTLDAGPDCDPRNFPARLAEVEGTRVAQGRD
FDAAGQLTGSDALVLDEAAAKALAEALRAATLRVGSVESKPYTRRPYEPFRTTTMQQEAG
RKLGFSSQRAMSVAQELYEKGFITYMRTDSVTLSTQAISAARRQVAELFGERFLPAKPRV
YTSKVKNAQEAHEAIRPAGDTFQHPDATGLAGDAFRLYQLIWRRTLASQMADARGESVSV
GIEAAFVATQLPAGEASSAKLVASGRTITFPGFLKAYVAGTDDDSATDDAQTRLPILDEG
QGLAAASVEPAGHETRPPARYTEPSLVAKLEELEIGRPSTYASIIRTITARDYVFKKGSA
LVPTWLAFAVTRLLEDHFPDLVDYAFTAQLEEQLDEIAAGKAKRLSVLTDFYFGGGDAHL
GLEKLVTELGDIDARALSTFPLGDSGIDVRVGRYGTYVEASDGRRANVPEDLPPDALTVE
LAEELLSKPLDEEHQLGVDEASGNMIVAKNGRFGPYVTEVLPDDAPKSAKPRTASLFKSM
SLDSVDLPTALKLMSLPRVVGADPEGNEITAQNGRYGPYLKRGTDSRSLTSEDQIFDISL
DEALAIYAQPKTRGRAAAAAPLKEFGPDPVSGKPVVLKSGRFGPYVTDGETNATLRRDDD
PATVAPERAFELLAEKRAKGPAPKRTTRKAPAKKATTARKPAAKNPTGTAAKK
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
ctgatggcttcgaagcgtctcgtgatcgtggagtcgccgaccaaggcgaccaagatcgcc
ggctacctcggtcgcgactacatcgtcgagtccagccgtgggcacgtccgtgacctgccg
acatcggcgtccgaggtgccagccaagtacaagggcgagaagtgggcccgcaccggcgtc
aacgtctccgacgacttccagccgatctacgtggtgtccgccgacaagaagtccaccatc
aaggacctgaaggccaagctcaaggaggtcgacgagctcctgctcgccaccgatggtgac
cgcgaaggcgaggccatcgcgtggcacctgatggaggagctcaagcccaaggttccggtc
aagcggatggtgttccacgaaatcaccaagcccgcgatcgaggaggccgtccggaacccc
cgcgagctcgacgtcgacctcgtcgacgcgcaggagacccgccgcatcctcgaccggctc
tacggctacgaggtctccccggtgctgtggaagaaggtcatgccccggctgtccgccggg
cgcgtgcagtccgtggcgacccggctcgtcgtcgacaaggaacgcgagcgcatcgccttc
gtccccgcctcctactgggacctggacgtcacgctcgacgccggccctgactgcgacccc
cgcaactttcccgcacgcctcgccgaggtggagggcacccgcgtcgcccagggccgtgac
ttcgacgccgcgggtcagctgaccggcagcgacgcgctcgtgctcgacgaggccgcggcc
aaggcgctcgccgaggcgctgcgtgccgccacgctgagggtcggctcggtggagtcgaag
ccctacacacgccgtccctacgagccgttccgcaccaccacgatgcagcaggaggccggc
cgcaagctcggcttctcctcgcagcgcgccatgtcagtggcccaggagctctacgaaaag
ggcttcatcacctacatgcgaaccgactcggtgacgctgtccacgcaggcgatctccgcg
gcccgcaggcaggtcgccgagctcttcggcgagcgcttcctccccgcgaagccgcgcgtc
tacacgtcgaaggtcaagaacgcgcaggaggcccatgaggccatccgccccgcaggcgac
accttccagcatcccgacgcgacaggcctggccggcgacgcattccgcctctaccagctg
atctggcggcgcacgctcgcctcgcagatggccgacgcccgcggcgagtccgtctctgtg
ggcatcgaggcggccttcgtcgcgacccagctgcccgccggcgaggcctcgtcggcgaag
ctcgtcgcctccggccgcaccatcacgttccccggcttcctgaaggcctacgtcgccggc
accgacgacgactccgccaccgacgacgcgcagacgcgcctccccatcctggacgagggc
caggggctggccgccgcgtccgtcgagccggccggtcacgagacccggcccccggcgcgc
tacaccgagccgtcgctcgtcgcgaaactcgaggaactcgagatcggccgcccgtcgacc
tacgcgtcgatcatccgcaccatcaccgcccgcgactacgtgttcaagaagggctccgcc
ctcgtgccgacgtggctcgcgttcgcggtcaccaggctgctcgaggaccacttcccggac
ctggtcgactacgccttcacggcccagctcgaggagcagctcgacgagatcgcggcaggc
aaggccaagcgactcagcgtgctgaccgacttctacttcggcggcggcgacgcccacctc
gggctcgagaagctcgtcaccgagctgggtgacatcgacgcacgcgcgctgtccaccttc
ccgctgggggactccgggatcgacgtgcgcgtcggccgctacggcacctacgtcgaggcc
tccgacggccgccgtgccaacgtgccggaggacctcccccccgacgcgctcaccgtcgag
ctcgccgaggagctcctcagcaagccgctcgacgaggagcaccagctcggcgtcgacgag
gcctccgggaacatgatcgtcgcgaagaacggacgcttcggcccctatgtcaccgaggtg
ctgcccgacgacgccccgaagtcggccaagccccgcacggcctcgctgttcaagtccatg
tcgctcgactcggtcgacctgccgaccgcgctgaagctcatgtcgctcccgcgcgtcgtc
ggcgccgatcccgagggcaacgagatcaccgcgcagaacggccgctacgggccgtacctc
aagcgcggcacggactcgcgctcgctgacgagcgaggaccagatcttcgacatctcgctg
gacgaggcactggccatctacgcgcagcccaagacgcgcggcagggcggcggccgccgcg
ccgctgaaggagttcggccccgaccccgtctccgggaagccggtcgtgctgaagtccggc
cgcttcgggccctacgtcaccgacggggagacgaacgcgacgctgcgccgcgatgacgac
cccgcgaccgtcgcgcccgagcgggccttcgagctgctcgccgagaagcgcgccaagggg
cccgcacccaagcgcaccacccgcaaggctcccgccaagaaggcgacgacggccaggaag
ccggccgccaagaaccccaccggcaccgccgcgaagaagtag
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